RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 SAMD9LQ8IVG5 1584 aa27.31■■□□□ 1.96
CUEDC1-202ENST00000407144 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
CUEDC1-202ENST00000407144 SLC20A2Q08357 652 aa27.31■■□□□ 1.96
CUEDC1-202ENST00000407144 FAM184AQ8NB25 1140 aa27.31■■□□□ 1.96
CUEDC1-202ENST00000407144 SPDYE4A6NLX3 237 aa27.3■■□□□ 1.96
CUEDC1-202ENST00000407144 CGNQ9P2M7 1197 aaKnown RBP27.3■■□□□ 1.96
CUEDC1-202ENST00000407144 CLTCL1P53675 1640 aa27.29■■□□□ 1.96
CUEDC1-202ENST00000407144 SMC4Q9NTJ3 1288 aa27.29■■□□□ 1.96
CUEDC1-202ENST00000407144 FRMPD1Q5SYB0 1578 aa27.29■■□□□ 1.96
CUEDC1-202ENST00000407144 CTIFO43310 598 aaKnown RBP27.28■■□□□ 1.96
CUEDC1-202ENST00000407144 ZNF771Q7L3S4 317 aaPredicted RBP27.28■■□□□ 1.96
CUEDC1-202ENST00000407144 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
CUEDC1-202ENST00000407144 GCC1Q96CN9 775 aa27.28■■□□□ 1.96
CUEDC1-202ENST00000407144 ZNF830Q96NB3 372 aaPredicted RBP27.28■■□□□ 1.96
CUEDC1-202ENST00000407144 CDC45O75419 566 aa27.27■■□□□ 1.96
CUEDC1-202ENST00000407144 PKP1Q13835 747 aa27.27■■□□□ 1.96
CUEDC1-202ENST00000407144 RNF214Q8ND24 703 aa27.27■■□□□ 1.96
CUEDC1-202ENST00000407144 SYAP1Q96A49 352 aaPredicted RBP27.27■■□□□ 1.96
CUEDC1-202ENST00000407144 DUOX2Q9NRD8 1548 aa27.27■■□□□ 1.96
CUEDC1-202ENST00000407144 CDK11BP21127 795 aaKnown RBP27.26■■□□□ 1.96
CUEDC1-202ENST00000407144 ZDHHC9Q9Y397 364 aa27.26■■□□□ 1.96
CUEDC1-202ENST00000407144 RICTORQ6R327 1708 aa27.26■■□□□ 1.95
CUEDC1-202ENST00000407144 ABCC1P33527 1531 aa27.25■■□□□ 1.95
CUEDC1-202ENST00000407144 U2AF2P26368 475 aaKnown RBP eCLIP27.25■■□□□ 1.95
CUEDC1-202ENST00000407144 CARD14Q9BXL6 1004 aa27.25■■□□□ 1.95
CUEDC1-202ENST00000407144 PHF14O94880 888 aa27.24■■□□□ 1.95
CUEDC1-202ENST00000407144 SYCP1Q15431 976 aa27.24■■□□□ 1.95
CUEDC1-202ENST00000407144 NOS1P29475 1434 aa27.24■■□□□ 1.95
CUEDC1-202ENST00000407144 CHAF1AQ13111 956 aaPredicted RBP27.24■■□□□ 1.95
CUEDC1-202ENST00000407144 TMEM57Q8N5G2 664 aa27.23■■□□□ 1.95
CUEDC1-202ENST00000407144 NSFL1CQ9UNZ2 370 aaKnown RBP27.23■■□□□ 1.95
CUEDC1-202ENST00000407144 SYCP2Q9BX26 1530 aa27.23■■□□□ 1.95
CUEDC1-202ENST00000407144 RSPH4AQ5TD94 716 aa27.22■■□□□ 1.95
CUEDC1-202ENST00000407144 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
CUEDC1-202ENST00000407144 CCDC66A2RUB6 948 aa27.21■■□□□ 1.95
CUEDC1-202ENST00000407144 SSH1Q8WYL5 1049 aa27.21■■□□□ 1.95
CUEDC1-202ENST00000407144 IPO8O15397 1037 aaKnown RBP27.2■■□□□ 1.94
CUEDC1-202ENST00000407144 POGZQ7Z3K3 1410 aa27.19■■□□□ 1.94
CUEDC1-202ENST00000407144 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
CUEDC1-202ENST00000407144 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
CUEDC1-202ENST00000407144 SPHKAPQ2M3C7 1700 aa27.19■■□□□ 1.94
CUEDC1-202ENST00000407144 FAM177BA6PVY3 158 aa27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 IRX5P78411 483 aaPredicted RBP27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 NOB1Q9ULX3 412 aaKnown RBP27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 VGLL3A8MV65 326 aa27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 RIOK3O14730 519 aaKnown RBP27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 ST18O60284 1047 aa27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 HNRNPMP52272 730 aaKnown RBP eCLIP27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 ANKRD45Q5TZF3 282 aa27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
CUEDC1-202ENST00000407144 DNAJC2Q99543 621 aaKnown RBP27.17■■□□□ 1.94
CUEDC1-202ENST00000407144 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
CUEDC1-202ENST00000407144 ERVK-7P63135 1459 aa27.17■■□□□ 1.94
CUEDC1-202ENST00000407144 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
CUEDC1-202ENST00000407144 TPM3P06753 285 aa27.16■■□□□ 1.94
CUEDC1-202ENST00000407144 SLFN14P0C7P3 912 aa27.16■■□□□ 1.94
CUEDC1-202ENST00000407144 KIAA1210Q9ULL0 1709 aa27.16■■□□□ 1.94
CUEDC1-202ENST00000407144 KLHL34Q8N239 644 aa27.16■■□□□ 1.94
CUEDC1-202ENST00000407144 MED14O60244 1454 aa27.16■■□□□ 1.94
CUEDC1-202ENST00000407144 USP26Q9BXU7 913 aa27.15■■□□□ 1.94
CUEDC1-202ENST00000407144 TTC12Q9H892 705 aaPredicted RBP27.15■■□□□ 1.94
CUEDC1-202ENST00000407144 ANKRD36BQ8N2N9 1353 aa27.15■■□□□ 1.94
CUEDC1-202ENST00000407144 EXOSC9Q06265 439 aaKnown RBP27.15■■□□□ 1.94
CUEDC1-202ENST00000407144 IGSF3O75054 1194 aa27.14■■□□□ 1.94
CUEDC1-202ENST00000407144 ZGPATQ8N5A5 531 aaKnown RBP27.14■■□□□ 1.94
CUEDC1-202ENST00000407144 KIAA1524Q8TCG1 905 aa27.14■■□□□ 1.94
CUEDC1-202ENST00000407144 FAM193AP78312 1265 aa27.13■■□□□ 1.93
CUEDC1-202ENST00000407144 CTNNA3Q9UI47 895 aa27.13■■□□□ 1.93
CUEDC1-202ENST00000407144 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
CUEDC1-202ENST00000407144 ADCY5O95622 1261 aa27.12■■□□□ 1.93
CUEDC1-202ENST00000407144 DDX41Q9UJV9 622 aaKnown RBP27.12■■□□□ 1.93
CUEDC1-202ENST00000407144 ZBTB7CA1YPR0 619 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 ZBTB22O15209 634 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 MORC1Q86VD1 984 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 MORC2Q9Y6X9 1032 aaPredicted RBP27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 IL16Q14005 1332 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 KCNJ4P48050 445 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 C17orf53Q8N3J3 647 aaPredicted RBP27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 CFAP53Q96M91 514 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 TIGD1Q96MW7 591 aa27.11■■□□□ 1.93
CUEDC1-202ENST00000407144 USP25Q9UHP3 1055 aa27.09■■□□□ 1.93
CUEDC1-202ENST00000407144 BRD1O95696 1058 aa27.09■■□□□ 1.93
CUEDC1-202ENST00000407144 ALDH1L2Q3SY69 923 aa27.08■■□□□ 1.93
CUEDC1-202ENST00000407144 TSR2Q969E8 191 aaKnown RBP27.08■■□□□ 1.93
CUEDC1-202ENST00000407144 NCBP1Q09161 790 aaKnown RBP27.08■■□□□ 1.93
CUEDC1-202ENST00000407144 TERF2Q15554 542 aa27.07■■□□□ 1.92
CUEDC1-202ENST00000407144 CREBRFQ8IUR6 639 aa27.06■■□□□ 1.92
CUEDC1-202ENST00000407144 TULP2O00295 520 aa27.05■■□□□ 1.92
CUEDC1-202ENST00000407144 BRPF1P55201 1214 aaPredicted RBP27.05■■□□□ 1.92
CUEDC1-202ENST00000407144 GSPT1P15170 499 aaKnown RBP27.05■■□□□ 1.92
CUEDC1-202ENST00000407144 INTS3Q68E01 1043 aaKnown RBP27.05■■□□□ 1.92
CUEDC1-202ENST00000407144 CALCOCO1Q9P1Z2 691 aa27.05■■□□□ 1.92
CUEDC1-202ENST00000407144 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
CUEDC1-202ENST00000407144 TSPYL1Q9H0U9 437 aa27.04■■□□□ 1.92
CUEDC1-202ENST00000407144 KDM4AO75164 1064 aa27.04■■□□□ 1.92
CUEDC1-202ENST00000407144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.04■■□□□ 1.92
CUEDC1-202ENST00000407144 ZBTB7BO15156 539 aaPredicted RBP27.03■■□□□ 1.92
CUEDC1-202ENST00000407144 HECW2Q9P2P5 1572 aa27.03■■□□□ 1.92
CUEDC1-202ENST00000407144 SBNO2Q9Y2G9 1366 aa27.02■■□□□ 1.92
CUEDC1-202ENST00000407144 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms