RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 JARID2Q92833 1246 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-205ENST00000406768 GTF3C6Q969F1 213 aa10.82□□□□□ -0.68
PSEN1-205ENST00000406768 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-205ENST00000406768 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-205ENST00000406768 PDLIM2Q96JY6 352 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 LMBRD1Q9NUN5 540 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 NUP155O75694 1391 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
PSEN1-205ENST00000406768 RAPGEF6Q8TEU7 1601 aa10.81□□□□□ -0.68
PSEN1-205ENST00000406768 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-205ENST00000406768 IVLP07476 585 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 TTLL5Q6EMB2 1281 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 FBLN2P98095 1184 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
PSEN1-205ENST00000406768 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 GCC1Q96CN9 775 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 EIF3JO75822 258 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 TPM1P09493 284 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 RARSP54136 660 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 BICD2Q8TD16 824 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 VPS37CA5D8V6 355 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 SLU7O95391 586 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 HSP90B1P14625 803 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 CASQ1P31415 396 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
PSEN1-205ENST00000406768 CCDC186Q7Z3E2 898 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 RUNDC1Q96C34 613 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 TMEM63CQ9P1W3 806 aa10.79□□□□□ -0.68
PSEN1-205ENST00000406768 HNRNPH2P55795 449 aaKnown RBP10.78□□□□□ -0.68
PSEN1-205ENST00000406768 BMP2KLQ5H9B9 411 aa10.78□□□□□ -0.68
PSEN1-205ENST00000406768 KDM4AO75164 1064 aa10.78□□□□□ -0.68
PSEN1-205ENST00000406768 ICE2Q659A1 982 aa10.78□□□□□ -0.68
PSEN1-205ENST00000406768 ANO2Q9NQ90 1003 aa10.78□□□□□ -0.68
PSEN1-205ENST00000406768 TRMT1Q9NXH9 659 aaKnown RBP10.78□□□□□ -0.68
PSEN1-205ENST00000406768 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
PSEN1-205ENST00000406768 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
PSEN1-205ENST00000406768 FAM107BQ9H098 131 aa10.77□□□□□ -0.68
PSEN1-205ENST00000406768 SUPT6HQ7KZ85 1726 aaKnown RBP10.77□□□□□ -0.68
PSEN1-205ENST00000406768 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 TBC1D9Q6ZT07 1266 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 CHMP4CQ96CF2 233 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
PSEN1-205ENST00000406768 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 CCP110O43303 1012 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 ERO1AQ96HE7 468 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
PSEN1-205ENST00000406768 PTGS1P23219 599 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 TCP11L2Q8N4U5 519 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 TNMDQ9H2S6 317 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 GOLIM4O00461 696 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 NEMFO60524 1076 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 SLC20A2Q08357 652 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 ANKRD30BQ9BXX2 1392 aa10.76□□□□□ -0.69
PSEN1-205ENST00000406768 HMMRO75330 724 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-205ENST00000406768 MAP2K2P36507 400 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 MAP3K11Q16584 847 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 NEK11Q8NG66 645 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 GEMIN8Q9NWZ8 242 aaKnown RBP10.75□□□□□ -0.69
PSEN1-205ENST00000406768 ABCA8O94911 1581 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 ATF7IPQ6VMQ6 1270 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 ERCC4Q92889 916 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-205ENST00000406768 RILPL2Q969X0 211 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 EPRSP07814 1512 aaKnown RBP10.75□□□□□ -0.69
PSEN1-205ENST00000406768 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 JRKLQ9Y4A0 524 aa10.75□□□□□ -0.69
PSEN1-205ENST00000406768 CAPN2P17655 700 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 ELF2Q15723 593 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 ERLIN1O75477 346 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 RBM28Q9NW13 759 aaKnown RBP10.74□□□□□ -0.69
PSEN1-205ENST00000406768 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 KIAA0754O94854 1291 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 SMC2O95347 1197 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 MX1P20591 662 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 SYCP1Q15431 976 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 GIMAP6Q6P9H5 292 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 ZNF526Q8TF50 670 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-205ENST00000406768 NOC3LQ8WTT2 800 aaKnown RBP10.74□□□□□ -0.69
PSEN1-205ENST00000406768 PPM1EQ8WY54 764 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 YY1AP1Q9H869 796 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 MICALL1Q8N3F8 863 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
PSEN1-205ENST00000406768 ZMYM3Q14202 1370 aa10.73□□□□□ -0.69
PSEN1-205ENST00000406768 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 PRG4Q92954 1404 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-205ENST00000406768 ARHGAP29Q52LW3 1261 aa10.73□□□□□ -0.69
PSEN1-205ENST00000406768 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms