RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
LIMK2-204ENST00000406516 ITSN1Q15811 1721 aa19.56■□□□□ 0.72
LIMK2-204ENST00000406516 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
LIMK2-204ENST00000406516 RARSP54136 660 aaKnown RBP19.56■□□□□ 0.72
LIMK2-204ENST00000406516 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
LIMK2-204ENST00000406516 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
LIMK2-204ENST00000406516 HSPA1LP34931 641 aa19.55■□□□□ 0.72
LIMK2-204ENST00000406516 BCL2L13Q9BXK5 485 aa19.55■□□□□ 0.72
LIMK2-204ENST00000406516 ANKRD36BQ8N2N9 1353 aa19.54■□□□□ 0.72
LIMK2-204ENST00000406516 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
LIMK2-204ENST00000406516 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
LIMK2-204ENST00000406516 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
LIMK2-204ENST00000406516 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
LIMK2-204ENST00000406516 USP6P35125 1406 aa19.53■□□□□ 0.72
LIMK2-204ENST00000406516 PXDNQ92626 1479 aa19.53■□□□□ 0.72
LIMK2-204ENST00000406516 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
LIMK2-204ENST00000406516 TNNQ9UQP3 1299 aa19.53■□□□□ 0.72
LIMK2-204ENST00000406516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
LIMK2-204ENST00000406516 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
LIMK2-204ENST00000406516 RLBP1P12271 317 aa19.5■□□□□ 0.71
LIMK2-204ENST00000406516 NHSL1Q5SYE7 1610 aa19.5■□□□□ 0.71
LIMK2-204ENST00000406516 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
LIMK2-204ENST00000406516 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
LIMK2-204ENST00000406516 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
LIMK2-204ENST00000406516 NUTM2GQ5VZR2 741 aa19.49■□□□□ 0.71
LIMK2-204ENST00000406516 NSD2O96028 1365 aa19.49■□□□□ 0.71
LIMK2-204ENST00000406516 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
LIMK2-204ENST00000406516 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
LIMK2-204ENST00000406516 SPATA31A3Q5VYP0 1347 aa19.49■□□□□ 0.71
LIMK2-204ENST00000406516 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
LIMK2-204ENST00000406516 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
LIMK2-204ENST00000406516 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 NME9Q86XW9 330 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 ABTB2Q8N961 1025 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 PHLPP1O60346 1717 aa19.47■□□□□ 0.71
LIMK2-204ENST00000406516 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
LIMK2-204ENST00000406516 AKAP12Q02952 1782 aa19.46■□□□□ 0.71
LIMK2-204ENST00000406516 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
LIMK2-204ENST00000406516 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
LIMK2-204ENST00000406516 EDC4Q6P2E9 1401 aaKnown RBP19.46■□□□□ 0.71
LIMK2-204ENST00000406516 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
LIMK2-204ENST00000406516 U2SURPO15042 1029 aaKnown RBP19.45■□□□□ 0.7
LIMK2-204ENST00000406516 FYB1O15117 783 aa19.44■□□□□ 0.7
LIMK2-204ENST00000406516 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
LIMK2-204ENST00000406516 SEC24BO95487 1268 aa19.44■□□□□ 0.7
LIMK2-204ENST00000406516 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
LIMK2-204ENST00000406516 TRPM3Q9HCF6 1732 aaPredicted RBP19.44■□□□□ 0.7
LIMK2-204ENST00000406516 MON2Q7Z3U7 1717 aa19.43■□□□□ 0.7
LIMK2-204ENST00000406516 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
LIMK2-204ENST00000406516 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
LIMK2-204ENST00000406516 NLRP6P59044 892 aa19.43■□□□□ 0.7
LIMK2-204ENST00000406516 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
LIMK2-204ENST00000406516 USP19O94966 1318 aa19.42■□□□□ 0.7
LIMK2-204ENST00000406516 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
LIMK2-204ENST00000406516 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
LIMK2-204ENST00000406516 AAMPQ13685 434 aa19.4■□□□□ 0.7
LIMK2-204ENST00000406516 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
LIMK2-204ENST00000406516 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
LIMK2-204ENST00000406516 ARHGEF10O15013 1369 aa19.38■□□□□ 0.69
LIMK2-204ENST00000406516 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
LIMK2-204ENST00000406516 JCADQ9P266 1359 aa19.38■□□□□ 0.69
LIMK2-204ENST00000406516 MVPQ14764 893 aaKnown RBP19.38■□□□□ 0.69
LIMK2-204ENST00000406516 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
LIMK2-204ENST00000406516 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
LIMK2-204ENST00000406516 PLEKHF1Q96S99 279 aa19.38■□□□□ 0.69
LIMK2-204ENST00000406516 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
LIMK2-204ENST00000406516 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
LIMK2-204ENST00000406516 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
LIMK2-204ENST00000406516 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
LIMK2-204ENST00000406516 SOX12O15370 315 aa19.37■□□□□ 0.69
LIMK2-204ENST00000406516 FBLN1P23142 703 aa19.37■□□□□ 0.69
LIMK2-204ENST00000406516 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
LIMK2-204ENST00000406516 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
LIMK2-204ENST00000406516 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
LIMK2-204ENST00000406516 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
LIMK2-204ENST00000406516 NUTM2EB1AL46 878 aaPredicted RBP19.36■□□□□ 0.69
LIMK2-204ENST00000406516 NUTM2AQ8IVF1 878 aaPredicted RBP19.36■□□□□ 0.69
LIMK2-204ENST00000406516 COG3Q96JB2 828 aa19.36■□□□□ 0.69
LIMK2-204ENST00000406516 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
LIMK2-204ENST00000406516 COL3A1P02461 1466 aaPredicted RBP19.36■□□□□ 0.69
LIMK2-204ENST00000406516 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
LIMK2-204ENST00000406516 GSE1Q14687 1217 aa19.35■□□□□ 0.69
LIMK2-204ENST00000406516 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
LIMK2-204ENST00000406516 GCP02774 474 aa19.34■□□□□ 0.69
LIMK2-204ENST00000406516 MED1Q15648 1581 aaPredicted RBP19.33■□□□□ 0.69
LIMK2-204ENST00000406516 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.68
LIMK2-204ENST00000406516 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.68
LIMK2-204ENST00000406516 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
LIMK2-204ENST00000406516 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
LIMK2-204ENST00000406516 SSH1Q8WYL5 1049 aa19.32■□□□□ 0.68
LIMK2-204ENST00000406516 TRIM27P14373 513 aa19.32■□□□□ 0.68
LIMK2-204ENST00000406516 HAP1P54257 671 aaPredicted RBP19.32■□□□□ 0.68
LIMK2-204ENST00000406516 RIPK4P57078 832 aa19.31■□□□□ 0.68
LIMK2-204ENST00000406516 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
LIMK2-204ENST00000406516 ZC3H6P61129 1189 aaKnown RBP19.31■□□□□ 0.68
LIMK2-204ENST00000406516 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
LIMK2-204ENST00000406516 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
LIMK2-204ENST00000406516 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms