RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MROH2AA6NES4 1674 aa20■□□□□ 0.79
COL4A3BP-204ENST00000405807 KIF16BQ96L93 1317 aa20■□□□□ 0.79
COL4A3BP-204ENST00000405807 TRIM35Q9UPQ4 493 aa19.99■□□□□ 0.79
COL4A3BP-204ENST00000405807 ZC3H13Q5T200 1668 aaKnown RBP19.99■□□□□ 0.79
COL4A3BP-204ENST00000405807 MYCNP04198 464 aaPredicted RBP19.99■□□□□ 0.79
COL4A3BP-204ENST00000405807 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
COL4A3BP-204ENST00000405807 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
COL4A3BP-204ENST00000405807 UQCRHLA0A096LP55 91 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 UQCRHP07919 91 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 RAB3GAP1Q15042 981 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 ADGRB3O60242 1522 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 APPP05067 770 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
COL4A3BP-204ENST00000405807 ADGRB1O14514 1584 aa19.97■□□□□ 0.79
COL4A3BP-204ENST00000405807 LNPKQ9C0E8 428 aa19.97■□□□□ 0.79
COL4A3BP-204ENST00000405807 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
COL4A3BP-204ENST00000405807 IRX5P78411 483 aaPredicted RBP19.96■□□□□ 0.79
COL4A3BP-204ENST00000405807 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
COL4A3BP-204ENST00000405807 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
COL4A3BP-204ENST00000405807 DYNC1I1O14576 645 aa19.95■□□□□ 0.78
COL4A3BP-204ENST00000405807 FAM193AP78312 1265 aa19.95■□□□□ 0.78
COL4A3BP-204ENST00000405807 ALDH1L2Q3SY69 923 aa19.95■□□□□ 0.78
COL4A3BP-204ENST00000405807 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
COL4A3BP-204ENST00000405807 PATL2C9JE40 543 aaKnown RBP19.94■□□□□ 0.78
COL4A3BP-204ENST00000405807 GAS2L3Q86XJ1 694 aa19.94■□□□□ 0.78
COL4A3BP-204ENST00000405807 PPRC1Q5VV67 1664 aaKnown RBP19.93■□□□□ 0.78
COL4A3BP-204ENST00000405807 PSEN1P49768 467 aa19.93■□□□□ 0.78
COL4A3BP-204ENST00000405807 CBX1P83916 185 aa19.92■□□□□ 0.78
COL4A3BP-204ENST00000405807 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
COL4A3BP-204ENST00000405807 DNAJC2Q99543 621 aaKnown RBP19.91■□□□□ 0.78
COL4A3BP-204ENST00000405807 KIF2CQ99661 725 aa19.91■□□□□ 0.78
COL4A3BP-204ENST00000405807 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
COL4A3BP-204ENST00000405807 SLC20A2Q08357 652 aa19.91■□□□□ 0.78
COL4A3BP-204ENST00000405807 ABCA9Q8IUA7 1624 aa19.91■□□□□ 0.78
COL4A3BP-204ENST00000405807 GOLGA6L22H0YM25 854 aa19.9■□□□□ 0.78
COL4A3BP-204ENST00000405807 CABP2Q9NPB3 220 aa19.9■□□□□ 0.78
COL4A3BP-204ENST00000405807 PPLO60437 1756 aa19.9■□□□□ 0.78
COL4A3BP-204ENST00000405807 ANKRD45Q5TZF3 282 aa19.89■□□□□ 0.78
COL4A3BP-204ENST00000405807 ZNF428Q96B54 188 aa19.89■□□□□ 0.78
COL4A3BP-204ENST00000405807 ZSCAN30Q86W11 494 aa19.89■□□□□ 0.77
COL4A3BP-204ENST00000405807 SOX12O15370 315 aa19.89■□□□□ 0.77
COL4A3BP-204ENST00000405807 CHMP4CQ96CF2 233 aa19.89■□□□□ 0.77
COL4A3BP-204ENST00000405807 BRPF1P55201 1214 aaPredicted RBP19.88■□□□□ 0.77
COL4A3BP-204ENST00000405807 TMED8Q6PL24 325 aaPredicted RBP19.88■□□□□ 0.77
COL4A3BP-204ENST00000405807 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
COL4A3BP-204ENST00000405807 TULP4Q9NRJ4 1543 aa19.87■□□□□ 0.77
COL4A3BP-204ENST00000405807 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
COL4A3BP-204ENST00000405807 MSNP26038 577 aaKnown RBP19.86■□□□□ 0.77
COL4A3BP-204ENST00000405807 CLEC17AQ6ZS10 378 aa19.86■□□□□ 0.77
COL4A3BP-204ENST00000405807 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
COL4A3BP-204ENST00000405807 TBC1D9Q6ZT07 1266 aa19.86■□□□□ 0.77
COL4A3BP-204ENST00000405807 ZBTB7BO15156 539 aaPredicted RBP19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 DIAPH1O60610 1272 aaKnown RBP19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 KCNJ4P48050 445 aa19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 A0A1W2PP64 1363 aa19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 CD2BP2O95400 341 aaKnown RBP19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 NPATQ14207 1427 aa19.85■□□□□ 0.77
COL4A3BP-204ENST00000405807 PPP1R9BQ96SB3 815 aa19.84■□□□□ 0.77
COL4A3BP-204ENST00000405807 CFAP74Q9C0B2 1584 aa19.84■□□□□ 0.77
COL4A3BP-204ENST00000405807 ARHGAP45Q92619 1136 aa19.84■□□□□ 0.77
COL4A3BP-204ENST00000405807 NASPP49321 788 aaPredicted RBP19.84■□□□□ 0.77
COL4A3BP-204ENST00000405807 GLI2P10070 1586 aa19.84■□□□□ 0.77
COL4A3BP-204ENST00000405807 IBTKQ9P2D0 1353 aaPredicted RBP19.83■□□□□ 0.77
COL4A3BP-204ENST00000405807 PPIP5K1Q6PFW1 1433 aa19.83■□□□□ 0.77
COL4A3BP-204ENST00000405807 KLHL40Q2TBA0 621 aa19.83■□□□□ 0.77
COL4A3BP-204ENST00000405807 ZBTB9Q96C00 473 aa19.83■□□□□ 0.77
COL4A3BP-204ENST00000405807 SSFA2P28290 1259 aa19.83■□□□□ 0.76
COL4A3BP-204ENST00000405807 TERF2IPQ9NYB0 399 aa19.83■□□□□ 0.76
COL4A3BP-204ENST00000405807 MED14O60244 1454 aa19.83■□□□□ 0.76
COL4A3BP-204ENST00000405807 SRPK2P78362 688 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-204ENST00000405807 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.761e-6■■□□□ 14
COL4A3BP-204ENST00000405807 FYB1O15117 783 aa19.82■□□□□ 0.76
COL4A3BP-204ENST00000405807 FCHSD2O94868 740 aa19.82■□□□□ 0.76
COL4A3BP-204ENST00000405807 DDX49Q9Y6V7 483 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-204ENST00000405807 GAS2L2Q8NHY3 880 aa19.81■□□□□ 0.76
COL4A3BP-204ENST00000405807 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
COL4A3BP-204ENST00000405807 CDC45O75419 566 aa19.81■□□□□ 0.76
COL4A3BP-204ENST00000405807 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
COL4A3BP-204ENST00000405807 AXDND1Q5T1B0 1012 aaPredicted RBP19.8■□□□□ 0.76
COL4A3BP-204ENST00000405807 BAG4O95429 457 aaKnown RBP19.8■□□□□ 0.76
COL4A3BP-204ENST00000405807 PTMAP06454 111 aaKnown RBP19.8■□□□□ 0.76
COL4A3BP-204ENST00000405807 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.764e-6■■■□□ 19
COL4A3BP-204ENST00000405807 KIDINS220Q9ULH0 1771 aa19.8■□□□□ 0.76
COL4A3BP-204ENST00000405807 GGT6Q6P531 493 aa19.8■□□□□ 0.76
COL4A3BP-204ENST00000405807 ARHGEF28Q8N1W1 1705 aaKnown RBP19.79■□□□□ 0.76
COL4A3BP-204ENST00000405807 IGSF3O75054 1194 aa19.79■□□□□ 0.76
COL4A3BP-204ENST00000405807 PNPLA6Q8IY17 1366 aa19.79■□□□□ 0.76
COL4A3BP-204ENST00000405807 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
COL4A3BP-204ENST00000405807 MRPL50Q8N5N7 158 aaKnown RBP19.79■□□□□ 0.76
COL4A3BP-204ENST00000405807 ATAD2Q6PL18 1390 aa19.78■□□□□ 0.76
COL4A3BP-204ENST00000405807 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
COL4A3BP-204ENST00000405807 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
COL4A3BP-204ENST00000405807 VAMP4O75379 141 aa19.77■□□□□ 0.76
COL4A3BP-204ENST00000405807 RABEP1Q15276 862 aa19.77■□□□□ 0.76
COL4A3BP-204ENST00000405807 NUCB2P80303 420 aa19.77■□□□□ 0.76
COL4A3BP-204ENST00000405807 REREQ9P2R6 1566 aa19.76■□□□□ 0.75
COL4A3BP-204ENST00000405807 GRIPAP1Q4V328 841 aa19.76■□□□□ 0.75
COL4A3BP-204ENST00000405807 PTCH1Q13635 1447 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms