RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
PRAME-205ENST00000405655 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
PRAME-205ENST00000405655 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
PRAME-205ENST00000405655 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
PRAME-205ENST00000405655 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
PRAME-205ENST00000405655 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
PRAME-205ENST00000405655 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
PRAME-205ENST00000405655 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
PRAME-205ENST00000405655 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.51
PRAME-205ENST00000405655 RLBP1P12271 317 aa18.27■□□□□ 0.51
PRAME-205ENST00000405655 FOXO3O43524 673 aa18.26■□□□□ 0.51
PRAME-205ENST00000405655 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
PRAME-205ENST00000405655 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
PRAME-205ENST00000405655 LTV1Q96GA3 475 aaPredicted RBP18.26■□□□□ 0.51
PRAME-205ENST00000405655 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
PRAME-205ENST00000405655 USP31Q70CQ4 1352 aa18.26■□□□□ 0.51
PRAME-205ENST00000405655 STRCP1A6NGW2 1772 aa18.25■□□□□ 0.51
PRAME-205ENST00000405655 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
PRAME-205ENST00000405655 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
PRAME-205ENST00000405655 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
PRAME-205ENST00000405655 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
PRAME-205ENST00000405655 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
PRAME-205ENST00000405655 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
PRAME-205ENST00000405655 ANKARQ7Z5J8 1434 aa18.24■□□□□ 0.51
PRAME-205ENST00000405655 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
PRAME-205ENST00000405655 AMPHP49418 695 aa18.23■□□□□ 0.51
PRAME-205ENST00000405655 PSME1Q06323 249 aa18.23■□□□□ 0.51
PRAME-205ENST00000405655 LMOD2Q6P5Q4 547 aa18.22■□□□□ 0.51
PRAME-205ENST00000405655 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
PRAME-205ENST00000405655 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
PRAME-205ENST00000405655 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
PRAME-205ENST00000405655 MCM10Q7L590 875 aa18.21■□□□□ 0.51
PRAME-205ENST00000405655 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
PRAME-205ENST00000405655 NEFMP07197 916 aa18.2■□□□□ 0.5
PRAME-205ENST00000405655 EYA1Q99502 592 aa18.2■□□□□ 0.5
PRAME-205ENST00000405655 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
PRAME-205ENST00000405655 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
PRAME-205ENST00000405655 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
PRAME-205ENST00000405655 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
PRAME-205ENST00000405655 HOXC9P31274 260 aa18.17■□□□□ 0.5
PRAME-205ENST00000405655 MBIPQ9NS73 344 aa18.17■□□□□ 0.5
PRAME-205ENST00000405655 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
PRAME-205ENST00000405655 LTN1O94822 1766 aa18.16■□□□□ 0.5
PRAME-205ENST00000405655 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
PRAME-205ENST00000405655 IGHDP01880 384 aa18.16■□□□□ 0.5
PRAME-205ENST00000405655 FLT4P35916 1363 aa18.16■□□□□ 0.5
PRAME-205ENST00000405655 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
PRAME-205ENST00000405655 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
PRAME-205ENST00000405655 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
PRAME-205ENST00000405655 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
PRAME-205ENST00000405655 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
PRAME-205ENST00000405655 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
PRAME-205ENST00000405655 NOB1Q9ULX3 412 aaKnown RBP18.14■□□□□ 0.49
PRAME-205ENST00000405655 IL16Q14005 1332 aa18.14■□□□□ 0.49
PRAME-205ENST00000405655 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.49
PRAME-205ENST00000405655 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
PRAME-205ENST00000405655 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 TRIM27P14373 513 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 PCDHB15Q9Y5E8 787 aa18.11■□□□□ 0.49
PRAME-205ENST00000405655 VAMP4O75379 141 aa18.1■□□□□ 0.49
PRAME-205ENST00000405655 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
PRAME-205ENST00000405655 IGSF1Q8N6C5 1336 aa18.09■□□□□ 0.49
PRAME-205ENST00000405655 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.49
PRAME-205ENST00000405655 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.49
PRAME-205ENST00000405655 NFAT5O94916 1531 aa18.08■□□□□ 0.48
PRAME-205ENST00000405655 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
PRAME-205ENST00000405655 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
PRAME-205ENST00000405655 IFT57Q9NWB7 429 aa18.08■□□□□ 0.48
PRAME-205ENST00000405655 STRCQ7RTU9 1775 aa18.08■□□□□ 0.48
PRAME-205ENST00000405655 ARHGEF10O15013 1369 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 GNAI1P63096 354 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 ATF3P18847 181 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 RGS3P49796 1198 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
PRAME-205ENST00000405655 AXIN2Q9Y2T1 843 aa18.07■□□□□ 0.48
PRAME-205ENST00000405655 GCP02774 474 aa18.06■□□□□ 0.48
PRAME-205ENST00000405655 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
PRAME-205ENST00000405655 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
PRAME-205ENST00000405655 TMEM57Q8N5G2 664 aa18.06■□□□□ 0.48
PRAME-205ENST00000405655 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
PRAME-205ENST00000405655 XIRP1Q702N8 1843 aaKnown RBP18.06■□□□□ 0.48
PRAME-205ENST00000405655 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
PRAME-205ENST00000405655 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
PRAME-205ENST00000405655 TWISTNBQ3B726 338 aaPredicted RBP18.06■□□□□ 0.48
PRAME-205ENST00000405655 LMTK3Q96Q04 1460 aa18.05■□□□□ 0.48
PRAME-205ENST00000405655 TRPM3Q9HCF6 1732 aaPredicted RBP18.05■□□□□ 0.48
PRAME-205ENST00000405655 MST1RQ04912 1400 aa18.05■□□□□ 0.48
PRAME-205ENST00000405655 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
PRAME-205ENST00000405655 IP6K1Q92551 441 aa18.04■□□□□ 0.48
PRAME-205ENST00000405655 KDRP35968 1356 aa18.04■□□□□ 0.48
PRAME-205ENST00000405655 MVPQ14764 893 aaKnown RBP18.04■□□□□ 0.48
PRAME-205ENST00000405655 ATF7IPQ6VMQ6 1270 aa18.04■□□□□ 0.48
PRAME-205ENST00000405655 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
PRAME-205ENST00000405655 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
PRAME-205ENST00000405655 CRB1P82279 1406 aa18.02■□□□□ 0.48
PRAME-205ENST00000405655 MSH5O43196 834 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms