RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-204ENST00000405493 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-204ENST00000405493 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
RAPGEF3-204ENST00000405493 AK7Q96M32 723 aa14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 C8orf37Q96NL8 207 aa14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 PHF14O94880 888 aa14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 KCNA6P17658 529 aa14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 SMARCC1Q92922 1105 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 NSD2O96028 1365 aa14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 CLASRPQ8N2M8 674 aaKnown RBP14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 SCAF11Q99590 1463 aaKnown RBP14.25□□□□□ -0.13
RAPGEF3-204ENST00000405493 SKOR2Q2VWA4 1001 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 REC8O95072 547 aa14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
RAPGEF3-204ENST00000405493 CCDC158Q5M9N0 1113 aa14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 ACEP12821 1306 aa14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
RAPGEF3-204ENST00000405493 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 IL27Q8NEV9 243 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 CDCA7Q9BWT1 371 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 TRIM29Q14134 588 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 TMOD2Q9NZR1 351 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
RAPGEF3-204ENST00000405493 NME9Q86XW9 330 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 SHANK2Q9UPX8 1470 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
RAPGEF3-204ENST00000405493 ZFYVE16Q7Z3T8 1539 aa14.21□□□□□ -0.14
RAPGEF3-204ENST00000405493 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 DDX49Q9Y6V7 483 aaKnown RBP14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 CHMP5Q9NZZ3 219 aa14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 MYL6BP14649 208 aa14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 RALYLQ86SE5 291 aaKnown RBP14.2□□□□□ -0.14
RAPGEF3-204ENST00000405493 DDB1Q16531 1140 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 BRPF3Q9ULD4 1205 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 DISP1Q96F81 1524 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 CPLX1O14810 134 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 HIP1O00291 1037 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 GNAI2P04899 355 aa14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF3-204ENST00000405493 PTCD1O75127 700 aaKnown RBP14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 POLD1P28340 1107 aa14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 NFXL1Q6ZNB6 911 aa14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 NOC3LQ8WTT2 800 aaKnown RBP14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
RAPGEF3-204ENST00000405493 TRPM2O94759 1503 aa14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 SURF6O75683 361 aaKnown RBP14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 TTC39AQ5SRH9 613 aa14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 PUS7Q96PZ0 661 aaKnown RBP14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
RAPGEF3-204ENST00000405493 EXOSC9Q06265 439 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 CCDC43Q96MW1 224 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 RFC4P35249 363 aa14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 RBM5P52756 815 aaKnown RBP eCLIP14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 CEP126Q9P2H0 1117 aa14.16□□□□□ -0.14
RAPGEF3-204ENST00000405493 MAGI2Q86UL8 1455 aa14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 IKQ13123 557 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 CHRNA2Q15822 529 aa14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
RAPGEF3-204ENST00000405493 FYB1O15117 783 aa14.15□□□□□ -0.15
RAPGEF3-204ENST00000405493 INTS3Q68E01 1043 aaKnown RBP14.15□□□□□ -0.15
RAPGEF3-204ENST00000405493 CNTROBQ8N137 903 aa14.14□□□□□ -0.15
RAPGEF3-204ENST00000405493 CCDC47Q96A33 483 aaKnown RBP14.14□□□□□ -0.15
RAPGEF3-204ENST00000405493 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
RAPGEF3-204ENST00000405493 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
RAPGEF3-204ENST00000405493 PES1O00541 588 aaKnown RBP14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 ANKRD36BQ8N2N9 1353 aa14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 FSD1Q9BTV5 496 aa14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 XBP1P17861 261 aa14.13□□□□□ -0.15
RAPGEF3-204ENST00000405493 IL2RBP14784 551 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 ST5P78524 1137 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 PDE4CQ08493 712 aa14.12□□□□□ -0.15
RAPGEF3-204ENST00000405493 SAFBQ15424 915 aaKnown RBP eCLIP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms