RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
PRAME-203ENST00000402697 LRRC7Q96NW7 1537 aa16.58■□□□□ 0.24
PRAME-203ENST00000402697 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
PRAME-203ENST00000402697 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
PRAME-203ENST00000402697 UPF2Q9HAU5 1272 aaKnown RBP16.57■□□□□ 0.24
PRAME-203ENST00000402697 CCDC61Q9Y6R9 512 aa16.57■□□□□ 0.24
PRAME-203ENST00000402697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRAME-203ENST00000402697 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
PRAME-203ENST00000402697 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
PRAME-203ENST00000402697 BECN1Q14457 450 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 AMOTL2Q9Y2J4 779 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 TRIM27P14373 513 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 TSR2Q969E8 191 aaKnown RBP16.55■□□□□ 0.24
PRAME-203ENST00000402697 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
PRAME-203ENST00000402697 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
PRAME-203ENST00000402697 PIK3R4Q99570 1358 aa16.54■□□□□ 0.24
PRAME-203ENST00000402697 FBLN1P23142 703 aa16.54■□□□□ 0.24
PRAME-203ENST00000402697 GNAI1P63096 354 aa16.54■□□□□ 0.24
PRAME-203ENST00000402697 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
PRAME-203ENST00000402697 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
PRAME-203ENST00000402697 IL13P35225 146 aa16.53■□□□□ 0.24
PRAME-203ENST00000402697 COG3Q96JB2 828 aa16.53■□□□□ 0.24
PRAME-203ENST00000402697 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.23
PRAME-203ENST00000402697 NME9Q86XW9 330 aa16.51■□□□□ 0.23
PRAME-203ENST00000402697 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
PRAME-203ENST00000402697 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
PRAME-203ENST00000402697 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
PRAME-203ENST00000402697 USP19O94966 1318 aa16.51■□□□□ 0.23
PRAME-203ENST00000402697 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
PRAME-203ENST00000402697 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
PRAME-203ENST00000402697 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
PRAME-203ENST00000402697 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
PRAME-203ENST00000402697 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
PRAME-203ENST00000402697 TNNQ9UQP3 1299 aa16.49■□□□□ 0.23
PRAME-203ENST00000402697 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
PRAME-203ENST00000402697 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
PRAME-203ENST00000402697 KCNA6P17658 529 aa16.48■□□□□ 0.23
PRAME-203ENST00000402697 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
PRAME-203ENST00000402697 KIF24Q5T7B8 1368 aa16.48■□□□□ 0.23
PRAME-203ENST00000402697 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
PRAME-203ENST00000402697 NUTM2FA1L443 756 aa16.47■□□□□ 0.23
PRAME-203ENST00000402697 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
PRAME-203ENST00000402697 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
PRAME-203ENST00000402697 USP6P35125 1406 aa16.46■□□□□ 0.23
PRAME-203ENST00000402697 NFKBIBQ15653 356 aa16.46■□□□□ 0.22
PRAME-203ENST00000402697 TMEM57Q8N5G2 664 aa16.46■□□□□ 0.22
PRAME-203ENST00000402697 EIF5BO60841 1220 aaKnown RBP16.45■□□□□ 0.22
PRAME-203ENST00000402697 VAMP4O75379 141 aa16.45■□□□□ 0.22
PRAME-203ENST00000402697 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
PRAME-203ENST00000402697 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
PRAME-203ENST00000402697 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
PRAME-203ENST00000402697 ACEP12821 1306 aa16.44■□□□□ 0.22
PRAME-203ENST00000402697 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
PRAME-203ENST00000402697 ANKARQ7Z5J8 1434 aa16.43■□□□□ 0.22
PRAME-203ENST00000402697 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
PRAME-203ENST00000402697 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
PRAME-203ENST00000402697 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
PRAME-203ENST00000402697 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
PRAME-203ENST00000402697 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
PRAME-203ENST00000402697 NWD1Q149M9 1564 aa16.42■□□□□ 0.22
PRAME-203ENST00000402697 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
PRAME-203ENST00000402697 NUCB1Q02818 461 aa16.42■□□□□ 0.22
PRAME-203ENST00000402697 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
PRAME-203ENST00000402697 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
PRAME-203ENST00000402697 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
PRAME-203ENST00000402697 ABCC4O15439 1325 aa16.41■□□□□ 0.22
PRAME-203ENST00000402697 SEC24BO95487 1268 aa16.41■□□□□ 0.22
PRAME-203ENST00000402697 HMOX1P09601 288 aa16.41■□□□□ 0.22
PRAME-203ENST00000402697 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
PRAME-203ENST00000402697 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
PRAME-203ENST00000402697 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
PRAME-203ENST00000402697 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
PRAME-203ENST00000402697 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
PRAME-203ENST00000402697 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
PRAME-203ENST00000402697 KIAA0232Q92628 1395 aa16.39■□□□□ 0.21
PRAME-203ENST00000402697 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
PRAME-203ENST00000402697 USP54Q70EL1 1684 aa16.38■□□□□ 0.21
PRAME-203ENST00000402697 GSE1Q14687 1217 aa16.38■□□□□ 0.21
PRAME-203ENST00000402697 ADGRL3Q9HAR2 1447 aa16.37■□□□□ 0.21
PRAME-203ENST00000402697 PEAK1Q9H792 1746 aa16.37■□□□□ 0.21
PRAME-203ENST00000402697 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
PRAME-203ENST00000402697 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
PRAME-203ENST00000402697 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
PRAME-203ENST00000402697 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
PRAME-203ENST00000402697 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
PRAME-203ENST00000402697 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
PRAME-203ENST00000402697 CHL1O00533 1208 aa16.33■□□□□ 0.21
PRAME-203ENST00000402697 TSPYL6Q8N831 410 aa16.33■□□□□ 0.2
PRAME-203ENST00000402697 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
PRAME-203ENST00000402697 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
PRAME-203ENST00000402697 PTPRCP08575 1304 aa16.32■□□□□ 0.2
PRAME-203ENST00000402697 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
PRAME-203ENST00000402697 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
PRAME-203ENST00000402697 ANTXR1Q9H6X2 564 aa16.31■□□□□ 0.2
PRAME-203ENST00000402697 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
PRAME-203ENST00000402697 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
PRAME-203ENST00000402697 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms