RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-201ENST00000401921 EID1Q9Y6B2 187 aa9.59□□□□□ -0.87
HDAC9-201ENST00000401921 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
HDAC9-201ENST00000401921 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-201ENST00000401921 PPLO60437 1756 aa9.58□□□□□ -0.88
HDAC9-201ENST00000401921 IFT57Q9NWB7 429 aa9.58□□□□□ -0.88
HDAC9-201ENST00000401921 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 CAMSAP1Q5T5Y3 1602 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 TSPOAP1O95153 1857 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 NEXMIFQ5QGS0 1516 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 HSP90AB2PQ58FF8 381 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 SMC5Q8IY18 1101 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 CHMP5Q9NZZ3 219 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 IL13P35225 146 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-201ENST00000401921 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
HDAC9-201ENST00000401921 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
HDAC9-201ENST00000401921 ZNF428Q96B54 188 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 TSPYL4Q9UJ04 414 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 NCLP19338 710 aaKnown RBP9.56□□□□□ -0.88
HDAC9-201ENST00000401921 NUCB1Q02818 461 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 ACEP12821 1306 aa9.56□□□□□ -0.88
HDAC9-201ENST00000401921 ARHGAP31Q2M1Z3 1444 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 NEURL4Q96JN8 1562 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 DIP2CQ9Y2E4 1556 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-201ENST00000401921 NLRP6P59044 892 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 STK31Q9BXU1 1019 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 METP08581 1390 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 CASC1Q6TDU7 716 aa9.55□□□□□ -0.88
HDAC9-201ENST00000401921 EIF4A2Q14240 407 aaKnown RBP9.54□□□□□ -0.88
HDAC9-201ENST00000401921 SMARCA5O60264 1052 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-201ENST00000401921 HSP90AA2PQ14568 343 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-201ENST00000401921 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
HDAC9-201ENST00000401921 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
HDAC9-201ENST00000401921 ZFYVE9O95405 1425 aa9.54□□□□□ -0.88
HDAC9-201ENST00000401921 PIK3C2BO00750 1634 aa9.54□□□□□ -0.88
HDAC9-201ENST00000401921 IFT172Q9UG01 1749 aa9.54□□□□□ -0.88
HDAC9-201ENST00000401921 GOLGA6L3A6NEY3 463 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 PTPRMP28827 1452 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 F6X3S4 739 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 L1TD1Q5T7N2 865 aaKnown RBP9.53□□□□□ -0.88
HDAC9-201ENST00000401921 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 FOXO3O43524 673 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-201ENST00000401921 MCM4P33991 863 aa9.53□□□□□ -0.88
HDAC9-201ENST00000401921 FKBP5Q13451 457 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-201ENST00000401921 C16orf71Q8IYS4 520 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-201ENST00000401921 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
HDAC9-201ENST00000401921 ZC3H13Q5T200 1668 aaKnown RBP9.52□□□□□ -0.88
HDAC9-201ENST00000401921 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
HDAC9-201ENST00000401921 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 SIGLEC1Q9BZZ2 1709 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 ALKQ9UM73 1620 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
HDAC9-201ENST00000401921 GOLGA6L22H0YM25 854 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 TRAK2O60296 914 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 CDC45O75419 566 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 TBC1D9Q6ZT07 1266 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 SHPRHQ149N8 1683 aa9.52□□□□□ -0.89
HDAC9-201ENST00000401921 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 HMMRO75330 724 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 GBP4Q96PP9 640 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 EIF2S2P20042 333 aaKnown RBP9.51□□□□□ -0.89
HDAC9-201ENST00000401921 BMP2KLQ5H9B9 411 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
HDAC9-201ENST00000401921 ARHGAP45Q92619 1136 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 EDC4Q6P2E9 1401 aaKnown RBP9.51□□□□□ -0.89
HDAC9-201ENST00000401921 TNRQ92752 1358 aa9.51□□□□□ -0.89
HDAC9-201ENST00000401921 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
HDAC9-201ENST00000401921 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-201ENST00000401921 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
HDAC9-201ENST00000401921 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-201ENST00000401921 MEIS3Q99687 375 aa9.5□□□□□ -0.89
HDAC9-201ENST00000401921 PRR36Q9H6K5 1346 aa9.5□□□□□ -0.89
HDAC9-201ENST00000401921 RILPL2Q969X0 211 aa9.5□□□□□ -0.89
HDAC9-201ENST00000401921 NAP1L5Q96NT1 182 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-201ENST00000401921 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 LTKP29376 864 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 EXOC6BQ9Y2D4 811 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 ARHGEF40Q8TER5 1519 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 PDE4CQ08493 712 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
HDAC9-201ENST00000401921 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
HDAC9-201ENST00000401921 SIRT2Q8IXJ6 389 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 OTUD7AQ8TE49 926 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-201ENST00000401921 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
HDAC9-201ENST00000401921 MTHFSDQ2M296 383 aaKnown RBP9.48□□□□□ -0.89
HDAC9-201ENST00000401921 INTS3Q68E01 1043 aaKnown RBP9.48□□□□□ -0.89
HDAC9-201ENST00000401921 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-201ENST00000401921 TRIM44Q96DX7 344 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms