RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
LINC00649-202ENST00000400353 PDE4CQ08493 712 aa13.75□□□□□ -0.21
LINC00649-202ENST00000400353 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
LINC00649-202ENST00000400353 USP6P35125 1406 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 IGHDP01880 384 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-202ENST00000400353 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 ACEP12821 1306 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
LINC00649-202ENST00000400353 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
LINC00649-202ENST00000400353 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 RLBP1P12271 317 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 GNAI1P63096 354 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 NPM2Q86SE8 214 aaKnown RBP13.73□□□□□ -0.21
LINC00649-202ENST00000400353 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 AMOTL2Q9Y2J4 779 aa13.73□□□□□ -0.21
LINC00649-202ENST00000400353 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
LINC00649-202ENST00000400353 DDX19BQ9UMR2 479 aa13.72□□□□□ -0.21
LINC00649-202ENST00000400353 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
LINC00649-202ENST00000400353 CEP170BQ9Y4F5 1589 aaPredicted RBP13.72□□□□□ -0.21
LINC00649-202ENST00000400353 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
LINC00649-202ENST00000400353 XRN1Q8IZH2 1706 aaKnown RBP13.72□□□□□ -0.21
LINC00649-202ENST00000400353 ATF7IPQ6VMQ6 1270 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 RGS3P49796 1198 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
LINC00649-202ENST00000400353 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
LINC00649-202ENST00000400353 HMOX1P09601 288 aa13.7□□□□□ -0.22
LINC00649-202ENST00000400353 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
LINC00649-202ENST00000400353 CHMP4BQ9H444 224 aaKnown RBP13.7□□□□□ -0.22
LINC00649-202ENST00000400353 FBLN1P23142 703 aa13.7□□□□□ -0.22
LINC00649-202ENST00000400353 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
LINC00649-202ENST00000400353 TRIM27P14373 513 aa13.69□□□□□ -0.22
LINC00649-202ENST00000400353 RRS1Q15050 365 aaKnown RBP13.69□□□□□ -0.22
LINC00649-202ENST00000400353 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
LINC00649-202ENST00000400353 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
LINC00649-202ENST00000400353 VIRMAQ69YN4 1812 aaKnown RBP13.69□□□□□ -0.22
LINC00649-202ENST00000400353 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
LINC00649-202ENST00000400353 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
LINC00649-202ENST00000400353 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
LINC00649-202ENST00000400353 NOB1Q9ULX3 412 aaKnown RBP13.68□□□□□ -0.22
LINC00649-202ENST00000400353 SETD1BQ9UPS6 1966 aaKnown RBP13.67□□□□□ -0.22
LINC00649-202ENST00000400353 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
LINC00649-202ENST00000400353 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
LINC00649-202ENST00000400353 HSPA2P54652 639 aa13.66□□□□□ -0.22
LINC00649-202ENST00000400353 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
LINC00649-202ENST00000400353 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
LINC00649-202ENST00000400353 ITPRIPQ8IWB1 547 aa13.65□□□□□ -0.22
LINC00649-202ENST00000400353 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
LINC00649-202ENST00000400353 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
LINC00649-202ENST00000400353 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
LINC00649-202ENST00000400353 VAMP4O75379 141 aa13.65□□□□□ -0.22
LINC00649-202ENST00000400353 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
LINC00649-202ENST00000400353 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
LINC00649-202ENST00000400353 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
LINC00649-202ENST00000400353 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
LINC00649-202ENST00000400353 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
LINC00649-202ENST00000400353 FLT4P35916 1363 aa13.63□□□□□ -0.23
LINC00649-202ENST00000400353 TMEM57Q8N5G2 664 aa13.63□□□□□ -0.23
LINC00649-202ENST00000400353 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
LINC00649-202ENST00000400353 FGD1P98174 961 aa13.62□□□□□ -0.23
LINC00649-202ENST00000400353 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
LINC00649-202ENST00000400353 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
LINC00649-202ENST00000400353 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
LINC00649-202ENST00000400353 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
LINC00649-202ENST00000400353 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
LINC00649-202ENST00000400353 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
LINC00649-202ENST00000400353 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
LINC00649-202ENST00000400353 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
LINC00649-202ENST00000400353 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
LINC00649-202ENST00000400353 MAP3K19Q56UN5 1328 aa13.59□□□□□ -0.23
LINC00649-202ENST00000400353 KCNA6P17658 529 aa13.59□□□□□ -0.23
LINC00649-202ENST00000400353 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
LINC00649-202ENST00000400353 ABCC4O15439 1325 aa13.58□□□□□ -0.24
LINC00649-202ENST00000400353 LMTK3Q96Q04 1460 aa13.58□□□□□ -0.24
LINC00649-202ENST00000400353 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
LINC00649-202ENST00000400353 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
LINC00649-202ENST00000400353 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
LINC00649-202ENST00000400353 UPF2Q9HAU5 1272 aaKnown RBP13.58□□□□□ -0.24
LINC00649-202ENST00000400353 CHD2O14647 1828 aaKnown RBP13.58□□□□□ -0.24
LINC00649-202ENST00000400353 CHL1O00533 1208 aa13.57□□□□□ -0.24
LINC00649-202ENST00000400353 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
LINC00649-202ENST00000400353 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
LINC00649-202ENST00000400353 KDRP35968 1356 aa13.57□□□□□ -0.24
LINC00649-202ENST00000400353 AMPHP49418 695 aa13.57□□□□□ -0.24
LINC00649-202ENST00000400353 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
LINC00649-202ENST00000400353 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
LINC00649-202ENST00000400353 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms