RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZBTB47Q9UFB7 747 aaPredicted RBP22.67■■□□□ 1.22
HLA-DQB1-204ENST00000399084 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
HLA-DQB1-204ENST00000399084 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
HLA-DQB1-204ENST00000399084 CHMP4BQ9H444 224 aaKnown RBP22.66■■□□□ 1.22
HLA-DQB1-204ENST00000399084 DDX19BQ9UMR2 479 aa22.65■■□□□ 1.22
HLA-DQB1-204ENST00000399084 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
HLA-DQB1-204ENST00000399084 ATF7IPQ6VMQ6 1270 aa22.65■■□□□ 1.22
HLA-DQB1-204ENST00000399084 DDRGK1Q96HY6 314 aa22.65■■□□□ 1.22
HLA-DQB1-204ENST00000399084 NCKAP5LQ9HCH0 1330 aa22.65■■□□□ 1.22
HLA-DQB1-204ENST00000399084 XRN1Q8IZH2 1706 aaKnown RBP22.64■■□□□ 1.22
HLA-DQB1-204ENST00000399084 HAP1P54257 671 aaPredicted RBP22.64■■□□□ 1.21
HLA-DQB1-204ENST00000399084 NALCNQ8IZF0 1738 aa22.64■■□□□ 1.21
HLA-DQB1-204ENST00000399084 IGHDP01880 384 aa22.63■■□□□ 1.21
HLA-DQB1-204ENST00000399084 SSH1Q8WYL5 1049 aa22.63■■□□□ 1.21
HLA-DQB1-204ENST00000399084 RLBP1P12271 317 aa22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 ARHGAP45Q92619 1136 aa22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 ZNF853P0CG23 659 aa22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 PHACTR3Q96KR7 559 aa22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 CEP170BQ9Y4F5 1589 aaPredicted RBP22.62■■□□□ 1.21
HLA-DQB1-204ENST00000399084 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 HMOX1P09601 288 aa22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 FBLN1P23142 703 aa22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 CFAP44Q96MT7 982 aa22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 BCL2L13Q9BXK5 485 aa22.6■■□□□ 1.21
HLA-DQB1-204ENST00000399084 TRIM27P14373 513 aa22.59■■□□□ 1.21
HLA-DQB1-204ENST00000399084 HDAC1Q13547 482 aaPredicted RBP22.57■■□□□ 1.2
HLA-DQB1-204ENST00000399084 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
HLA-DQB1-204ENST00000399084 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
HLA-DQB1-204ENST00000399084 EIF4A2Q14240 407 aaKnown RBP22.56■■□□□ 1.2
HLA-DQB1-204ENST00000399084 C8orf34Q49A92 452 aa22.56■■□□□ 1.2
HLA-DQB1-204ENST00000399084 NGDNQ8NEJ9 315 aaKnown RBP22.56■■□□□ 1.2
HLA-DQB1-204ENST00000399084 NOB1Q9ULX3 412 aaKnown RBP22.56■■□□□ 1.2
HLA-DQB1-204ENST00000399084 VAMP4O75379 141 aa22.54■■□□□ 1.2
HLA-DQB1-204ENST00000399084 ARHGEF10O15013 1369 aa22.54■■□□□ 1.2
HLA-DQB1-204ENST00000399084 SBNO1A3KN83 1393 aa22.54■■□□□ 1.2
HLA-DQB1-204ENST00000399084 ZNF142P52746 1687 aaPredicted RBP22.53■■□□□ 1.2
HLA-DQB1-204ENST00000399084 RGS3P49796 1198 aa22.53■■□□□ 1.2
HLA-DQB1-204ENST00000399084 FLT4P35916 1363 aa22.53■■□□□ 1.2
HLA-DQB1-204ENST00000399084 RGPD1P0DJD0 1748 aa22.52■■□□□ 1.2
HLA-DQB1-204ENST00000399084 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
HLA-DQB1-204ENST00000399084 USP54Q70EL1 1684 aa22.51■■□□□ 1.19
HLA-DQB1-204ENST00000399084 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 DLG5Q8TDM6 1919 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 SULT6B1Q6IMI4 303 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 ZBTB40Q9NUA8 1239 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 TNNQ9UQP3 1299 aa22.5■■□□□ 1.19
HLA-DQB1-204ENST00000399084 KCNA6P17658 529 aa22.49■■□□□ 1.19
HLA-DQB1-204ENST00000399084 ITPRIPQ8IWB1 547 aa22.49■■□□□ 1.19
HLA-DQB1-204ENST00000399084 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
HLA-DQB1-204ENST00000399084 MRPL50Q8N5N7 158 aaKnown RBP22.48■■□□□ 1.19
HLA-DQB1-204ENST00000399084 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
HLA-DQB1-204ENST00000399084 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
HLA-DQB1-204ENST00000399084 KDRP35968 1356 aa22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 TWISTNBQ3B726 338 aaPredicted RBP22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 API5Q9BZZ5 524 aaKnown RBP22.47■■□□□ 1.19
HLA-DQB1-204ENST00000399084 TMEM57Q8N5G2 664 aa22.46■■□□□ 1.19
HLA-DQB1-204ENST00000399084 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
HLA-DQB1-204ENST00000399084 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
HLA-DQB1-204ENST00000399084 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
HLA-DQB1-204ENST00000399084 VIRMAQ69YN4 1812 aaKnown RBP22.46■■□□□ 1.19
HLA-DQB1-204ENST00000399084 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.19
HLA-DQB1-204ENST00000399084 PAK3O75914 559 aaPredicted RBP22.45■■□□□ 1.19
HLA-DQB1-204ENST00000399084 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.19
HLA-DQB1-204ENST00000399084 PDZRN3Q9UPQ7 1066 aa22.45■■□□□ 1.19
HLA-DQB1-204ENST00000399084 CHL1O00533 1208 aa22.45■■□□□ 1.18
HLA-DQB1-204ENST00000399084 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
HLA-DQB1-204ENST00000399084 SMC5Q8IY18 1101 aa22.45■■□□□ 1.18
HLA-DQB1-204ENST00000399084 RGPD8O14715 1765 aaPredicted RBP22.43■■□□□ 1.18
HLA-DQB1-204ENST00000399084 AMPHP49418 695 aa22.43■■□□□ 1.18
HLA-DQB1-204ENST00000399084 PIK3C2AO00443 1686 aa22.42■■□□□ 1.18
HLA-DQB1-204ENST00000399084 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
HLA-DQB1-204ENST00000399084 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
HLA-DQB1-204ENST00000399084 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
HLA-DQB1-204ENST00000399084 ABCC4O15439 1325 aa22.41■■□□□ 1.18
HLA-DQB1-204ENST00000399084 NLRP6P59044 892 aa22.41■■□□□ 1.18
HLA-DQB1-204ENST00000399084 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
HLA-DQB1-204ENST00000399084 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
HLA-DQB1-204ENST00000399084 DAXXQ9UER7 740 aaPredicted RBP22.4■■□□□ 1.18
HLA-DQB1-204ENST00000399084 ZBTB7BO15156 539 aaPredicted RBP22.39■■□□□ 1.17
HLA-DQB1-204ENST00000399084 TSPYL6Q8N831 410 aa22.39■■□□□ 1.17
HLA-DQB1-204ENST00000399084 SOS1Q07889 1333 aaPredicted RBP22.38■■□□□ 1.17
HLA-DQB1-204ENST00000399084 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
HLA-DQB1-204ENST00000399084 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
HLA-DQB1-204ENST00000399084 PHF8Q9UPP1 1060 aa22.38■■□□□ 1.17
HLA-DQB1-204ENST00000399084 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
HLA-DQB1-204ENST00000399084 GCC1Q96CN9 775 aa22.37■■□□□ 1.17
HLA-DQB1-204ENST00000399084 BABAM1Q9NWV8 329 aa22.37■■□□□ 1.17
HLA-DQB1-204ENST00000399084 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
HLA-DQB1-204ENST00000399084 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
HLA-DQB1-204ENST00000399084 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
HLA-DQB1-204ENST00000399084 PTPRCP08575 1304 aa22.35■■□□□ 1.17
HLA-DQB1-204ENST00000399084 CRB1P82279 1406 aa22.35■■□□□ 1.17
HLA-DQB1-204ENST00000399084 ABTB2Q8N961 1025 aa22.35■■□□□ 1.17
HLA-DQB1-204ENST00000399084 EYA1Q99502 592 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms