RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 PIK3R4Q99570 1358 aa14.42□□□□□ -0.1
C4orf3-201ENST00000399075 HDGFP51858 240 aaKnown RBP14.42□□□□□ -0.1
C4orf3-201ENST00000399075 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
C4orf3-201ENST00000399075 NRKQ7Z2Y5 1582 aa14.42□□□□□ -0.1
C4orf3-201ENST00000399075 PTCH1Q13635 1447 aa14.41□□□□□ -0.1
C4orf3-201ENST00000399075 ARHGAP45Q92619 1136 aa14.41□□□□□ -0.1
C4orf3-201ENST00000399075 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
C4orf3-201ENST00000399075 GSE1Q14687 1217 aa14.4□□□□□ -0.1
C4orf3-201ENST00000399075 CHMP4BQ9H444 224 aaKnown RBP14.4□□□□□ -0.1
C4orf3-201ENST00000399075 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
C4orf3-201ENST00000399075 GNAI1P63096 354 aa14.4□□□□□ -0.1
C4orf3-201ENST00000399075 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
C4orf3-201ENST00000399075 UBR1Q8IWV7 1749 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 KIF13AQ9H1H9 1805 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 ZNF853P0CG23 659 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 NME9Q86XW9 330 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 EMILIN1Q9Y6C2 1016 aa14.39□□□□□ -0.11
C4orf3-201ENST00000399075 TOPAZ1Q8N9V7 1692 aa14.38□□□□□ -0.11
C4orf3-201ENST00000399075 DLG5Q8TDM6 1919 aa14.38□□□□□ -0.11
C4orf3-201ENST00000399075 PDE4CQ08493 712 aa14.38□□□□□ -0.11
C4orf3-201ENST00000399075 TNRQ92752 1358 aa14.38□□□□□ -0.11
C4orf3-201ENST00000399075 COG3Q96JB2 828 aa14.38□□□□□ -0.11
C4orf3-201ENST00000399075 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
C4orf3-201ENST00000399075 TMEM2Q9UHN6 1383 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 VAMP4O75379 141 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 MLECQ14165 292 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 FBLN1P23142 703 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 NUCB1Q02818 461 aa14.37□□□□□ -0.11
C4orf3-201ENST00000399075 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
C4orf3-201ENST00000399075 HMOX1P09601 288 aa14.36□□□□□ -0.11
C4orf3-201ENST00000399075 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
C4orf3-201ENST00000399075 FRAT2O75474 233 aaPredicted RBP14.36□□□□□ -0.11
C4orf3-201ENST00000399075 ANTXR1Q9H6X2 564 aa14.35□□□□□ -0.11
C4orf3-201ENST00000399075 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
C4orf3-201ENST00000399075 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 NALCNQ8IZF0 1738 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 ABCC4O15439 1325 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 TBC1D2Q9BYX2 928 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 MBIPQ9NS73 344 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
C4orf3-201ENST00000399075 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.11
C4orf3-201ENST00000399075 ZBTB7BO15156 539 aaPredicted RBP14.33□□□□□ -0.12
C4orf3-201ENST00000399075 ZRANB1Q9UGI0 708 aa14.33□□□□□ -0.12
C4orf3-201ENST00000399075 C22orf23Q9BZE7 217 aa14.33□□□□□ -0.12
C4orf3-201ENST00000399075 ROBO2Q9HCK4 1378 aa14.33□□□□□ -0.12
C4orf3-201ENST00000399075 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.12
C4orf3-201ENST00000399075 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.12
C4orf3-201ENST00000399075 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
C4orf3-201ENST00000399075 GCC1Q96CN9 775 aa14.32□□□□□ -0.12
C4orf3-201ENST00000399075 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
C4orf3-201ENST00000399075 CHD1LQ86WJ1 897 aa14.32□□□□□ -0.12
C4orf3-201ENST00000399075 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
C4orf3-201ENST00000399075 TSPYL6Q8N831 410 aa14.31□□□□□ -0.12
C4orf3-201ENST00000399075 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
C4orf3-201ENST00000399075 TWISTNBQ3B726 338 aaPredicted RBP14.31□□□□□ -0.12
C4orf3-201ENST00000399075 API5Q9BZZ5 524 aaKnown RBP14.31□□□□□ -0.12
C4orf3-201ENST00000399075 PLEKHG3A1L390 1219 aa14.3□□□□□ -0.12
C4orf3-201ENST00000399075 RRS1Q15050 365 aaKnown RBP14.3□□□□□ -0.12
C4orf3-201ENST00000399075 NCKAP5LQ9HCH0 1330 aa14.3□□□□□ -0.12
C4orf3-201ENST00000399075 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
C4orf3-201ENST00000399075 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
C4orf3-201ENST00000399075 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
C4orf3-201ENST00000399075 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
C4orf3-201ENST00000399075 USP6P35125 1406 aa14.29□□□□□ -0.12
C4orf3-201ENST00000399075 USP31Q70CQ4 1352 aa14.29□□□□□ -0.12
C4orf3-201ENST00000399075 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
C4orf3-201ENST00000399075 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
C4orf3-201ENST00000399075 SLKQ9H2G2 1235 aaPredicted RBP14.28□□□□□ -0.12
C4orf3-201ENST00000399075 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
C4orf3-201ENST00000399075 PEAK1Q9H792 1746 aa14.27□□□□□ -0.12
C4orf3-201ENST00000399075 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.12
C4orf3-201ENST00000399075 LNPKQ9C0E8 428 aa14.27□□□□□ -0.12
C4orf3-201ENST00000399075 SSH2Q76I76 1423 aa14.27□□□□□ -0.13
C4orf3-201ENST00000399075 EIF4A2Q14240 407 aaKnown RBP14.27□□□□□ -0.13
C4orf3-201ENST00000399075 KIAA0232Q92628 1395 aa14.27□□□□□ -0.13
C4orf3-201ENST00000399075 ACEP12821 1306 aa14.26□□□□□ -0.13
C4orf3-201ENST00000399075 GLIPR1L2Q4G1C9 344 aa14.26□□□□□ -0.13
C4orf3-201ENST00000399075 SLIT1O75093 1534 aa14.25□□□□□ -0.13
C4orf3-201ENST00000399075 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
C4orf3-201ENST00000399075 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
C4orf3-201ENST00000399075 RBM10P98175 930 aaKnown RBP14.25□□□□□ -0.13
C4orf3-201ENST00000399075 SIRT2Q8IXJ6 389 aa14.25□□□□□ -0.13
C4orf3-201ENST00000399075 RIMS1Q86UR5 1692 aaKnown RBP14.24□□□□□ -0.13
C4orf3-201ENST00000399075 FAM83GA6ND36 823 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 FGD1P98174 961 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 SNX21Q969T3 373 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 CHL1O00533 1208 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 INTS3Q68E01 1043 aaKnown RBP14.24□□□□□ -0.13
C4orf3-201ENST00000399075 TTC21AQ8NDW8 1320 aa14.24□□□□□ -0.13
C4orf3-201ENST00000399075 PTPRUQ92729 1446 aa14.23□□□□□ -0.13
C4orf3-201ENST00000399075 ELL2O00472 640 aaPredicted RBP14.23□□□□□ -0.13
C4orf3-201ENST00000399075 SULT6B1Q6IMI4 303 aa14.23□□□□□ -0.13
C4orf3-201ENST00000399075 CHMP5Q9NZZ3 219 aa14.23□□□□□ -0.13
C4orf3-201ENST00000399075 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms