RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.18
TMF1-201ENST00000398559 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
TMF1-201ENST00000398559 FAM193AP78312 1265 aa13.95□□□□□ -0.18
TMF1-201ENST00000398559 ZNF428Q96B54 188 aa13.95□□□□□ -0.18
TMF1-201ENST00000398559 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
TMF1-201ENST00000398559 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
TMF1-201ENST00000398559 FYCO1Q9BQS8 1478 aa13.95□□□□□ -0.18
TMF1-201ENST00000398559 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 CENPHQ9H3R5 247 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
TMF1-201ENST00000398559 STIM1Q13586 685 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 NUP62CLQ9H1M0 184 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 CNNM1Q9NRU3 951 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 ERICH4A6NGS2 130 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 CCDC69A6NI79 296 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 TMEM132AQ24JP5 1023 aa13.94□□□□□ -0.18
TMF1-201ENST00000398559 DHX37Q8IY37 1157 aaKnown RBP13.94□□□□□ -0.18
TMF1-201ENST00000398559 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.94□□□□□ -0.181e-8■□□□□ 9.2
TMF1-201ENST00000398559 TRIM22Q8IYM9 498 aa13.93□□□□□ -0.18
TMF1-201ENST00000398559 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
TMF1-201ENST00000398559 LUC7LQ9NQ29 371 aaKnown RBP13.93□□□□□ -0.18
TMF1-201ENST00000398559 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
TMF1-201ENST00000398559 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
TMF1-201ENST00000398559 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
TMF1-201ENST00000398559 SEPT7Q16181 437 aaKnown RBP13.93□□□□□ -0.18
TMF1-201ENST00000398559 ABTB2Q8N961 1025 aa13.93□□□□□ -0.18
TMF1-201ENST00000398559 JAKMIP1Q96N16 626 aaKnown RBP13.92□□□□□ -0.18
TMF1-201ENST00000398559 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
TMF1-201ENST00000398559 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
TMF1-201ENST00000398559 SYCE3A1L190 88 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 ATAD2BQ9ULI0 1458 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 ATF3P18847 181 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 ZHX3Q9H4I2 956 aa13.92□□□□□ -0.18
TMF1-201ENST00000398559 CWC27Q6UX04 472 aaKnown RBP13.91□□□□□ -0.18
TMF1-201ENST00000398559 SRCIN1Q9C0H9 1055 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 ANKRD62A6NC57 917 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 MEX3CQ5U5Q3 659 aaKnown RBP13.91□□□□□ -0.18
TMF1-201ENST00000398559 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
TMF1-201ENST00000398559 CFAP45Q9UL16 551 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 PDCL2Q8N4E4 241 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 CCDC102AQ96A19 550 aa13.91□□□□□ -0.18
TMF1-201ENST00000398559 ZRSR2Q15696 482 aaKnown RBP13.9□□□□□ -0.18
TMF1-201ENST00000398559 TXLNBQ8N3L3 684 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 GOLGA6L7A0A1B0GV03 622 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 TAX1BP1Q86VP1 789 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 AACSQ86V21 672 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
TMF1-201ENST00000398559 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
TMF1-201ENST00000398559 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
TMF1-201ENST00000398559 ZSCAN30Q86W11 494 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
TMF1-201ENST00000398559 LRRFIP2Q9Y608 721 aaKnown RBP13.89□□□□□ -0.19
TMF1-201ENST00000398559 CAMK4Q16566 473 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 ARHGAP5Q13017 1502 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 IGF1RP08069 1367 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 ATP2B2Q01814 1243 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 SLC12A5Q9H2X9 1139 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 NACAP1Q9BZK3 213 aa13.89□□□□□ -0.19
TMF1-201ENST00000398559 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
TMF1-201ENST00000398559 MAP3K11Q16584 847 aa13.88□□□□□ -0.19
TMF1-201ENST00000398559 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
TMF1-201ENST00000398559 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
TMF1-201ENST00000398559 FKBP4Q02790 459 aaKnown RBP eCLIP13.88□□□□□ -0.19
TMF1-201ENST00000398559 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
TMF1-201ENST00000398559 CDKL5O76039 1030 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 MYL6BP14649 208 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 CASKIN1Q8WXD9 1431 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 KIAA1328Q86T90 577 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
TMF1-201ENST00000398559 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 SRGAP3O43295 1099 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
TMF1-201ENST00000398559 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
TMF1-201ENST00000398559 UBXN4Q92575 508 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 WWC2Q6AWC2 1192 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 CBX1P83916 185 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
TMF1-201ENST00000398559 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms