RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 EIF2S2P20042 333 aaKnown RBP13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
CSGALNACT1-202ENST00000397998 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 MCM2P49736 904 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 EIF4G3O43432 1585 aaKnown RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 PRIM1P49642 420 aaKnown RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 WAPLQ7Z5K2 1190 aa13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 NGDNQ8NEJ9 315 aaKnown RBP13.47□□□□□ -0.25
CSGALNACT1-202ENST00000397998 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 MCM10Q7L590 875 aa13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 IDI1Q13907 227 aa13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 NSD2O96028 1365 aa13.46□□□□□ -0.25
CSGALNACT1-202ENST00000397998 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.26
CSGALNACT1-202ENST00000397998 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.26
CSGALNACT1-202ENST00000397998 SDSP20132 328 aa13.46□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 VAMP4O75379 141 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 GNAI2P04899 355 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 F6X3S4 739 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 NME9Q86XW9 330 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 PTPRTO14522 1441 aa13.45□□□□□ -0.26
CSGALNACT1-202ENST00000397998 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
CSGALNACT1-202ENST00000397998 MTERF4Q7Z6M4 381 aaKnown RBP13.44□□□□□ -0.26
CSGALNACT1-202ENST00000397998 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
CSGALNACT1-202ENST00000397998 LRRCC1Q9C099 1032 aa13.44□□□□□ -0.26
CSGALNACT1-202ENST00000397998 CD2BP2O95400 341 aaKnown RBP13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 GNAI3P08754 354 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 SLC52A1Q9NWF4 448 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
CSGALNACT1-202ENST00000397998 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 MAST1Q9Y2H9 1570 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 HSP90B1P14625 803 aaKnown RBP13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 MEIS3Q99687 375 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
CSGALNACT1-202ENST00000397998 OFD1O75665 1012 aa13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 KRT24Q2M2I5 525 aa13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ZKSCAN1P17029 563 aaPredicted RBP13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 FANCAO15360 1455 aa13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
CSGALNACT1-202ENST00000397998 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 SAMD9LQ8IVG5 1584 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 LRSAM1Q6UWE0 723 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 HMGN5P82970 282 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
CSGALNACT1-202ENST00000397998 NRDCO43847 1150 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZNF830Q96NB3 372 aaPredicted RBP13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 SASS6Q6UVJ0 657 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZMYM3Q14202 1370 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 MX1P20591 662 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 PKP1Q13835 747 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ANKRD44Q8N8A2 993 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 SYNMO15061 1565 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 C9orf78Q9NZ63 289 aaPredicted RBP13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ATP10AO60312 1499 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
CSGALNACT1-202ENST00000397998 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms