RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CHRFAM7A-202ENST00000397827 IPO8O15397 1037 aaKnown RBP23.28■■□□□ 1.32
CHRFAM7A-202ENST00000397827 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
CHRFAM7A-202ENST00000397827 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
CHRFAM7A-202ENST00000397827 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
CHRFAM7A-202ENST00000397827 KNDC1Q76NI1 1749 aa23.27■■□□□ 1.32
CHRFAM7A-202ENST00000397827 LTKP29376 864 aa23.27■■□□□ 1.32
CHRFAM7A-202ENST00000397827 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
CHRFAM7A-202ENST00000397827 UBR1Q8IWV7 1749 aa23.26■■□□□ 1.31
CHRFAM7A-202ENST00000397827 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ZBTB40Q9NUA8 1239 aa23.26■■□□□ 1.31
CHRFAM7A-202ENST00000397827 HDAC1Q13547 482 aaPredicted RBP23.26■■□□□ 1.31
CHRFAM7A-202ENST00000397827 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
CHRFAM7A-202ENST00000397827 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ZNF692Q9BU19 519 aaPredicted RBP23.25■■□□□ 1.31
CHRFAM7A-202ENST00000397827 VAMP4O75379 141 aa23.24■■□□□ 1.31
CHRFAM7A-202ENST00000397827 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
CHRFAM7A-202ENST00000397827 SLC26A8Q96RN1 970 aa23.24■■□□□ 1.31
CHRFAM7A-202ENST00000397827 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
CHRFAM7A-202ENST00000397827 GNAI1P63096 354 aa23.23■■□□□ 1.31
CHRFAM7A-202ENST00000397827 DCTN1Q14203 1278 aa23.23■■□□□ 1.31
CHRFAM7A-202ENST00000397827 C3P01024 1663 aa23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ACEP12821 1306 aa23.22■■□□□ 1.31
CHRFAM7A-202ENST00000397827 ZNF853P0CG23 659 aa23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.2■■□□□ 1.3
CHRFAM7A-202ENST00000397827 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
CHRFAM7A-202ENST00000397827 UPF2Q9HAU5 1272 aaKnown RBP23.19■■□□□ 1.3
CHRFAM7A-202ENST00000397827 DLG5Q8TDM6 1919 aa23.19■■□□□ 1.3
CHRFAM7A-202ENST00000397827 SOX12O15370 315 aa23.19■■□□□ 1.3
CHRFAM7A-202ENST00000397827 C8orf58Q8NAV2 365 aa23.18■■□□□ 1.3
CHRFAM7A-202ENST00000397827 BRPF1P55201 1214 aaPredicted RBP23.18■■□□□ 1.3
CHRFAM7A-202ENST00000397827 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
CHRFAM7A-202ENST00000397827 TWISTNBQ3B726 338 aaPredicted RBP23.18■■□□□ 1.3
CHRFAM7A-202ENST00000397827 CFAP44Q96MT7 982 aa23.17■■□□□ 1.3
CHRFAM7A-202ENST00000397827 TBC1D32Q96NH3 1257 aa23.17■■□□□ 1.3
CHRFAM7A-202ENST00000397827 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
CHRFAM7A-202ENST00000397827 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
CHRFAM7A-202ENST00000397827 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
CHRFAM7A-202ENST00000397827 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
CHRFAM7A-202ENST00000397827 PTPRUQ92729 1446 aa23.14■■□□□ 1.3
CHRFAM7A-202ENST00000397827 ZBTB7BO15156 539 aaPredicted RBP23.14■■□□□ 1.3
CHRFAM7A-202ENST00000397827 HSP90AB2PQ58FF8 381 aa23.14■■□□□ 1.29
CHRFAM7A-202ENST00000397827 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
CHRFAM7A-202ENST00000397827 PLEKHG3A1L390 1219 aa23.13■■□□□ 1.29
CHRFAM7A-202ENST00000397827 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
CHRFAM7A-202ENST00000397827 BECN1Q14457 450 aa23.12■■□□□ 1.29
CHRFAM7A-202ENST00000397827 ARHGAP45Q92619 1136 aa23.12■■□□□ 1.29
CHRFAM7A-202ENST00000397827 AMOTL2Q9Y2J4 779 aa23.12■■□□□ 1.29
CHRFAM7A-202ENST00000397827 EID1Q9Y6B2 187 aa23.12■■□□□ 1.29
CHRFAM7A-202ENST00000397827 USP6P35125 1406 aa23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 MFAP1P55081 439 aaKnown RBP23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 OVOS2A0A0J9YW53 1432 aa23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 PTCH1Q13635 1447 aa23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 OVOS2Q6IE36 1432 aa23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 NUCB1Q02818 461 aa23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 SLKQ9H2G2 1235 aaPredicted RBP23.11■■□□□ 1.29
CHRFAM7A-202ENST00000397827 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
CHRFAM7A-202ENST00000397827 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
CHRFAM7A-202ENST00000397827 MCM10Q7L590 875 aa23.09■■□□□ 1.29
CHRFAM7A-202ENST00000397827 GSE1Q14687 1217 aa23.08■■□□□ 1.29
CHRFAM7A-202ENST00000397827 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
CHRFAM7A-202ENST00000397827 CHD1LQ86WJ1 897 aa23.08■■□□□ 1.29
CHRFAM7A-202ENST00000397827 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
CHRFAM7A-202ENST00000397827 ABCC4O15439 1325 aa23.07■■□□□ 1.28
CHRFAM7A-202ENST00000397827 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
CHRFAM7A-202ENST00000397827 ANKRD45Q5TZF3 282 aa23.06■■□□□ 1.28
CHRFAM7A-202ENST00000397827 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
CHRFAM7A-202ENST00000397827 PEAK1Q9H792 1746 aa23.06■■□□□ 1.28
CHRFAM7A-202ENST00000397827 SIRT2Q8IXJ6 389 aa23.05■■□□□ 1.28
CHRFAM7A-202ENST00000397827 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
CHRFAM7A-202ENST00000397827 MAP3K19Q56UN5 1328 aa23.03■■□□□ 1.28
CHRFAM7A-202ENST00000397827 API5Q9BZZ5 524 aaKnown RBP23.02■■□□□ 1.28
CHRFAM7A-202ENST00000397827 CHMP4BQ9H444 224 aaKnown RBP23.02■■□□□ 1.28
CHRFAM7A-202ENST00000397827 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
CHRFAM7A-202ENST00000397827 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
CHRFAM7A-202ENST00000397827 SSH2Q76I76 1423 aa23.02■■□□□ 1.28
CHRFAM7A-202ENST00000397827 SPRYD3Q8NCJ5 442 aa23.01■■□□□ 1.27
CHRFAM7A-202ENST00000397827 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
CHRFAM7A-202ENST00000397827 CHL1O00533 1208 aa23.01■■□□□ 1.27
CHRFAM7A-202ENST00000397827 FOXO3O43524 673 aa23.01■■□□□ 1.27
CHRFAM7A-202ENST00000397827 GCC1Q96CN9 775 aa23.01■■□□□ 1.27
CHRFAM7A-202ENST00000397827 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
CHRFAM7A-202ENST00000397827 MIS18AQ9NYP9 233 aa23■■□□□ 1.27
CHRFAM7A-202ENST00000397827 ZMYND15Q9H091 742 aa22.99■■□□□ 1.27
CHRFAM7A-202ENST00000397827 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
CHRFAM7A-202ENST00000397827 ANTXR1Q9H6X2 564 aa22.99■■□□□ 1.27
CHRFAM7A-202ENST00000397827 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
CHRFAM7A-202ENST00000397827 SLIT1O75093 1534 aa22.98■■□□□ 1.27
CHRFAM7A-202ENST00000397827 ARHGAP23Q9P227 1491 aa22.97■■□□□ 1.27
CHRFAM7A-202ENST00000397827 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
CHRFAM7A-202ENST00000397827 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms