RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 POLKQ9UBT6 870 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 IQSEC2Q5JU85 1478 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 HECW2Q9P2P5 1572 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 MYO5BQ9ULV0 1848 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 CCDC27Q2M243 656 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
SSR1-202ENST00000397511 BBXQ8WY36 941 aaPredicted RBP6.26□□□□□ -1.41
SSR1-202ENST00000397511 SLC52A1Q9NWF4 448 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 DDX19BQ9UMR2 479 aa6.26□□□□□ -1.41
SSR1-202ENST00000397511 MCM4P33991 863 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 TBC1D32Q96NH3 1257 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 ABCC11Q96J66 1382 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 MLH3Q9UHC1 1453 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 RIMBP3CA6NJZ7 1639 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 RIMBP3BA6NNM3 1639 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 RIMBP3Q9UFD9 1639 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 NEXMIFQ5QGS0 1516 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 DNAJC5Q9H3Z4 198 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 YTHDC2Q9H6S0 1430 aaKnown RBP6.25□□□□□ -1.41
SSR1-202ENST00000397511 ANTXR1Q9H6X2 564 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 ARHGEF28Q8N1W1 1705 aaKnown RBP6.25□□□□□ -1.41
SSR1-202ENST00000397511 SETBP1Q9Y6X0 1596 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 TRAK2O60296 914 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 FAM13BQ9NYF5 915 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 MIS18AQ9NYP9 233 aa6.25□□□□□ -1.41
SSR1-202ENST00000397511 MYO3AQ8NEV4 1616 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 NEURL4Q96JN8 1562 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 OFD1O75665 1012 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 ZC3H13Q5T200 1668 aaKnown RBP6.24□□□□□ -1.41
SSR1-202ENST00000397511 LMTK2Q8IWU2 1503 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
SSR1-202ENST00000397511 AEBP1Q8IUX7 1158 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 ESF1Q9H501 851 aaKnown RBP6.24□□□□□ -1.41
SSR1-202ENST00000397511 NINLQ9Y2I6 1382 aa6.24□□□□□ -1.41
SSR1-202ENST00000397511 TAF7LQ5H9L4 462 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 POTEHQ6S545 545 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 C8orf58Q8NAV2 365 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 RBM42Q9BTD8 480 aaKnown RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 MBIPQ9NS73 344 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 ZBTB40Q9NUA8 1239 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 ZHX1Q9UKY1 873 aaPredicted RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 TSPOAP1O95153 1857 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 IPO8O15397 1037 aaKnown RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 MCM10Q7L590 875 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 NAP1L2Q9ULW6 460 aaPredicted RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 PIK3C2BO00750 1634 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 DDX11L8A8MPP1 907 aa6.23□□□□□ -1.41
SSR1-202ENST00000397511 MSNP26038 577 aaKnown RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 TWISTNBQ3B726 338 aaPredicted RBP6.23□□□□□ -1.41
SSR1-202ENST00000397511 PTPRMP28827 1452 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 NLRP1Q9C000 1473 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 CD163L1Q9NR16 1453 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 FCHSD2O94868 740 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 ZSCAN30Q86W11 494 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 CHD1LQ86WJ1 897 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 NECTIN2Q92692 538 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 NSD2O96028 1365 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 VAMP4O75379 141 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 GTF2E1P29083 439 aaPredicted RBP6.22□□□□□ -1.41
SSR1-202ENST00000397511 DMTNQ08495 405 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 NUTM2GQ5VZR2 741 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 SULT6B1Q6IMI4 303 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 C16orf71Q8IYS4 520 aaPredicted RBP6.22□□□□□ -1.41
SSR1-202ENST00000397511 ANP32BQ92688 251 aaKnown RBP6.22□□□□□ -1.41
SSR1-202ENST00000397511 NUDT16Q96DE0 195 aaKnown RBP6.22□□□□□ -1.41
SSR1-202ENST00000397511 COG3Q96JB2 828 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 DIP2CQ9Y2E4 1556 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
SSR1-202ENST00000397511 BRD2P25440 801 aaKnown RBP6.21□□□□□ -1.41
SSR1-202ENST00000397511 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.41
SSR1-202ENST00000397511 SLC26A8Q96RN1 970 aa6.21□□□□□ -1.41
SSR1-202ENST00000397511 CHMP5Q9NZZ3 219 aa6.21□□□□□ -1.41
SSR1-202ENST00000397511 HDAC1Q13547 482 aaPredicted RBP6.21□□□□□ -1.42
SSR1-202ENST00000397511 NFE2L2Q16236 605 aa6.21□□□□□ -1.42
SSR1-202ENST00000397511 SLC4A10Q6U841 1118 aa6.21□□□□□ -1.42
SSR1-202ENST00000397511 HSCBQ8IWL3 235 aa6.21□□□□□ -1.42
SSR1-202ENST00000397511 WASLO00401 505 aaPredicted RBP6.21□□□□□ -1.42
SSR1-202ENST00000397511 ZBTB7BO15156 539 aaPredicted RBP6.21□□□□□ -1.42
SSR1-202ENST00000397511 CD2BP2O95400 341 aaKnown RBP6.21□□□□□ -1.42
SSR1-202ENST00000397511 CEBPAP49715 358 aaPredicted RBP6.21□□□□□ -1.42
SSR1-202ENST00000397511 SMC5Q8IY18 1101 aa6.21□□□□□ -1.42
SSR1-202ENST00000397511 METP08581 1390 aa6.21□□□□□ -1.42
SSR1-202ENST00000397511 PPIP5K1Q6PFW1 1433 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 FOXO3O43524 673 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 HSP90AB1P08238 724 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 NUCB1Q02818 461 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 HSP90AB2PQ58FF8 381 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 SIRT2Q8IXJ6 389 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 PRDM10Q9NQV6 1147 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 R3HCC1Q9Y3T6 440 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 LRRC7Q96NW7 1537 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 IL13P35225 146 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 MRPL50Q8N5N7 158 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 OTUD7AQ8TE49 926 aaPredicted RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 RBM33Q96EV2 1170 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 COL3A1P02461 1466 aaPredicted RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 MAP2P11137 1827 aaKnown RBP6.2□□□□□ -1.42
SSR1-202ENST00000397511 UQCRHLA0A096LP55 91 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms