RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
UCA1-201ENST00000397381 MSNP26038 577 aaKnown RBP11.54□□□□□ -0.56
UCA1-201ENST00000397381 CALD1Q05682 793 aaKnown RBP11.54□□□□□ -0.56
UCA1-201ENST00000397381 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
UCA1-201ENST00000397381 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
UCA1-201ENST00000397381 PIK3C2BO00750 1634 aa11.54□□□□□ -0.56
UCA1-201ENST00000397381 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
UCA1-201ENST00000397381 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
UCA1-201ENST00000397381 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
UCA1-201ENST00000397381 FCHSD2O94868 740 aa11.53□□□□□ -0.56
UCA1-201ENST00000397381 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
UCA1-201ENST00000397381 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
UCA1-201ENST00000397381 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
UCA1-201ENST00000397381 CLTCQ00610 1675 aaKnown RBP11.53□□□□□ -0.56
UCA1-201ENST00000397381 NEXMIFQ5QGS0 1516 aa11.53□□□□□ -0.56
UCA1-201ENST00000397381 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.56
UCA1-201ENST00000397381 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.56
UCA1-201ENST00000397381 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
UCA1-201ENST00000397381 ABCC4O15439 1325 aa11.52□□□□□ -0.57
UCA1-201ENST00000397381 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.57
UCA1-201ENST00000397381 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
UCA1-201ENST00000397381 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
UCA1-201ENST00000397381 FYB1O15117 783 aa11.51□□□□□ -0.57
UCA1-201ENST00000397381 CYP2E1P05181 493 aaPredicted RBP11.51□□□□□ -0.57
UCA1-201ENST00000397381 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
UCA1-201ENST00000397381 VAMP4O75379 141 aa11.51□□□□□ -0.57
UCA1-201ENST00000397381 MAP7D2Q96T17 732 aa11.51□□□□□ -0.57
UCA1-201ENST00000397381 FRMPD1Q5SYB0 1578 aa11.51□□□□□ -0.57
UCA1-201ENST00000397381 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
UCA1-201ENST00000397381 ABCC3O15438 1527 aa11.5□□□□□ -0.57
UCA1-201ENST00000397381 ZNF500O60304 480 aaPredicted RBP11.49□□□□□ -0.57
UCA1-201ENST00000397381 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
UCA1-201ENST00000397381 ZSCAN23Q3MJ62 389 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 MCTP1Q6DN14 999 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 PDLIM2Q96JY6 352 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
UCA1-201ENST00000397381 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 CD163L1Q9NR16 1453 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 GNAI1P63096 354 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 NFE2L2Q16236 605 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 NOL7Q9UMY1 257 aaKnown RBP11.49□□□□□ -0.57
UCA1-201ENST00000397381 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
UCA1-201ENST00000397381 MCM5P33992 734 aa11.48□□□□□ -0.57
UCA1-201ENST00000397381 HDGFL2Q7Z4V5 671 aaPredicted RBP11.48□□□□□ -0.57
UCA1-201ENST00000397381 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
UCA1-201ENST00000397381 YEATS2Q9ULM3 1422 aa11.48□□□□□ -0.57
UCA1-201ENST00000397381 GSPT1P15170 499 aaKnown RBP11.48□□□□□ -0.57
UCA1-201ENST00000397381 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
UCA1-201ENST00000397381 INTS3Q68E01 1043 aaKnown RBP11.48□□□□□ -0.57
UCA1-201ENST00000397381 CAVIN1Q6NZI2 390 aaKnown RBP11.48□□□□□ -0.57
UCA1-201ENST00000397381 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
UCA1-201ENST00000397381 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 USP26Q9BXU7 913 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 MLH3Q9UHC1 1453 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 PTPRMP28827 1452 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 ST18O60284 1047 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
UCA1-201ENST00000397381 DCTPP1Q9H773 170 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
UCA1-201ENST00000397381 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.57
UCA1-201ENST00000397381 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
UCA1-201ENST00000397381 CASC1Q6TDU7 716 aa11.46□□□□□ -0.57
UCA1-201ENST00000397381 RBSNQ9H1K0 784 aa11.46□□□□□ -0.57
UCA1-201ENST00000397381 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
UCA1-201ENST00000397381 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
UCA1-201ENST00000397381 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
UCA1-201ENST00000397381 GGT6Q6P531 493 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 MTERF4Q7Z6M4 381 aaKnown RBP11.44□□□□□ -0.58
UCA1-201ENST00000397381 CCDC39Q9UFE4 941 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 POGZQ7Z3K3 1410 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
UCA1-201ENST00000397381 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 TSPYL6Q8N831 410 aa11.44□□□□□ -0.58
UCA1-201ENST00000397381 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
UCA1-201ENST00000397381 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
UCA1-201ENST00000397381 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
UCA1-201ENST00000397381 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
UCA1-201ENST00000397381 REC8O95072 547 aa11.43□□□□□ -0.58
UCA1-201ENST00000397381 MBD3O95983 291 aa11.43□□□□□ -0.58
UCA1-201ENST00000397381 ANKRD44Q8N8A2 993 aa11.43□□□□□ -0.58
UCA1-201ENST00000397381 GPT2Q8TD30 523 aa11.43□□□□□ -0.58
UCA1-201ENST00000397381 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
UCA1-201ENST00000397381 DYNC1I1O14576 645 aa11.42□□□□□ -0.58
UCA1-201ENST00000397381 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
UCA1-201ENST00000397381 STK26Q9P289 416 aa11.42□□□□□ -0.58
UCA1-201ENST00000397381 POLKQ9UBT6 870 aa11.42□□□□□ -0.58
UCA1-201ENST00000397381 YTHDC2Q9H6S0 1430 aaKnown RBP11.42□□□□□ -0.58
UCA1-201ENST00000397381 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
UCA1-201ENST00000397381 NUTM2DQ5VT03 806 aaPredicted RBP11.42□□□□□ -0.58
UCA1-201ENST00000397381 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
UCA1-201ENST00000397381 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
UCA1-201ENST00000397381 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
UCA1-201ENST00000397381 ZDHHC9Q9Y397 364 aa11.41□□□□□ -0.58
UCA1-201ENST00000397381 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
UCA1-201ENST00000397381 ATP7BP35670 1465 aa11.41□□□□□ -0.58
UCA1-201ENST00000397381 SDSP20132 328 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms