RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ADAMTS13Q76LX8 1427 aa30.22■■■□□ 2.43
PABPN1-202ENST00000397276 DDX19BQ9UMR2 479 aa30.21■■■□□ 2.43
PABPN1-202ENST00000397276 ACEP12821 1306 aa30.21■■■□□ 2.43
PABPN1-202ENST00000397276 FAM83GA6ND36 823 aa30.2■■■□□ 2.43
PABPN1-202ENST00000397276 TSPYL6Q8N831 410 aa30.2■■■□□ 2.43
PABPN1-202ENST00000397276 DCTN1Q14203 1278 aa30.19■■■□□ 2.42
PABPN1-202ENST00000397276 CDC42BPGQ6DT37 1551 aa30.19■■■□□ 2.42
PABPN1-202ENST00000397276 UBR1Q8IWV7 1749 aa30.18■■■□□ 2.42
PABPN1-202ENST00000397276 AATKQ6ZMQ8 1374 aa30.18■■■□□ 2.42
PABPN1-202ENST00000397276 IPO8O15397 1037 aaKnown RBP30.17■■■□□ 2.42
PABPN1-202ENST00000397276 KIF16BQ96L93 1317 aa30.17■■■□□ 2.42
PABPN1-202ENST00000397276 TTC21BQ7Z4L5 1316 aa30.16■■■□□ 2.42
PABPN1-202ENST00000397276 EID1Q9Y6B2 187 aa30.16■■■□□ 2.42
PABPN1-202ENST00000397276 AEBP1Q8IUX7 1158 aa30.15■■■□□ 2.42
PABPN1-202ENST00000397276 MBIPQ9NS73 344 aa30.15■■■□□ 2.42
PABPN1-202ENST00000397276 CDK12Q9NYV4 1490 aaPredicted RBP30.15■■■□□ 2.42
PABPN1-202ENST00000397276 USP19O94966 1318 aa30.14■■■□□ 2.42
PABPN1-202ENST00000397276 ALDH1L2Q3SY69 923 aa30.14■■■□□ 2.42
PABPN1-202ENST00000397276 VAMP4O75379 141 aa30.14■■■□□ 2.41
PABPN1-202ENST00000397276 AMOTL2Q9Y2J4 779 aa30.13■■■□□ 2.41
PABPN1-202ENST00000397276 GNAI1P63096 354 aa30.13■■■□□ 2.41
PABPN1-202ENST00000397276 FRAT2O75474 233 aaPredicted RBP30.12■■■□□ 2.41
PABPN1-202ENST00000397276 SULT6B1Q6IMI4 303 aa30.12■■■□□ 2.41
PABPN1-202ENST00000397276 PLEKHG1Q9ULL1 1385 aa30.12■■■□□ 2.41
PABPN1-202ENST00000397276 CALD1Q05682 793 aaKnown RBP30.11■■■□□ 2.41
PABPN1-202ENST00000397276 EIF4A2Q14240 407 aaKnown RBP30.11■■■□□ 2.41
PABPN1-202ENST00000397276 ZBTB40Q9NUA8 1239 aa30.11■■■□□ 2.41
PABPN1-202ENST00000397276 KNDC1Q76NI1 1749 aa30.11■■■□□ 2.41
PABPN1-202ENST00000397276 IFT57Q9NWB7 429 aa30.1■■■□□ 2.41
PABPN1-202ENST00000397276 PTPRUQ92729 1446 aa30.1■■■□□ 2.41
PABPN1-202ENST00000397276 HSP90AB2PQ58FF8 381 aa30.09■■■□□ 2.41
PABPN1-202ENST00000397276 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.09■■■□□ 2.41
PABPN1-202ENST00000397276 C8orf58Q8NAV2 365 aa30.08■■■□□ 2.41
PABPN1-202ENST00000397276 HDAC1Q13547 482 aaPredicted RBP30.07■■■□□ 2.4
PABPN1-202ENST00000397276 MON2Q7Z3U7 1717 aa30.07■■■□□ 2.4
PABPN1-202ENST00000397276 TWISTNBQ3B726 338 aaPredicted RBP30.07■■■□□ 2.4
PABPN1-202ENST00000397276 MRPL50Q8N5N7 158 aaKnown RBP30.06■■■□□ 2.4
PABPN1-202ENST00000397276 PLEKHG3A1L390 1219 aa30.06■■■□□ 2.4
PABPN1-202ENST00000397276 ZNF853P0CG23 659 aa30.06■■■□□ 2.4
PABPN1-202ENST00000397276 CFAP44Q96MT7 982 aa30.05■■■□□ 2.4
PABPN1-202ENST00000397276 LMOD3Q0VAK6 560 aa30.04■■■□□ 2.4
PABPN1-202ENST00000397276 C1orf115Q9H7X2 142 aa30.04■■■□□ 2.4
PABPN1-202ENST00000397276 C3P01024 1663 aa30.04■■■□□ 2.4
PABPN1-202ENST00000397276 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
PABPN1-202ENST00000397276 ZNF428Q96B54 188 aa30.02■■■□□ 2.4
PABPN1-202ENST00000397276 AKAP12Q02952 1782 aa30.02■■■□□ 2.4
PABPN1-202ENST00000397276 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.39
PABPN1-202ENST00000397276 USP6P35125 1406 aa30.01■■■□□ 2.39
PABPN1-202ENST00000397276 MCM10Q7L590 875 aa30.01■■■□□ 2.39
PABPN1-202ENST00000397276 KRT24Q2M2I5 525 aa29.99■■■□□ 2.39
PABPN1-202ENST00000397276 UPF2Q9HAU5 1272 aaKnown RBP29.99■■■□□ 2.39
PABPN1-202ENST00000397276 SMC5Q8IY18 1101 aa29.99■■■□□ 2.39
PABPN1-202ENST00000397276 ZBTB7BO15156 539 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-202ENST00000397276 BRPF1P55201 1214 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-202ENST00000397276 LNPKQ9C0E8 428 aa29.98■■■□□ 2.39
PABPN1-202ENST00000397276 TBX22Q9Y458 520 aa29.97■■■□□ 2.39
PABPN1-202ENST00000397276 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
PABPN1-202ENST00000397276 OVOS2A0A0J9YW53 1432 aa29.96■■■□□ 2.39
PABPN1-202ENST00000397276 OVOS2Q6IE36 1432 aa29.96■■■□□ 2.39
PABPN1-202ENST00000397276 VIRMAQ69YN4 1812 aaKnown RBP29.94■■■□□ 2.38
PABPN1-202ENST00000397276 TRHP20396 242 aaPredicted RBP29.94■■■□□ 2.38
PABPN1-202ENST00000397276 NUTM2GQ5VZR2 741 aa29.94■■■□□ 2.38
PABPN1-202ENST00000397276 ARHGAP45Q92619 1136 aa29.93■■■□□ 2.38
PABPN1-202ENST00000397276 MAP3K19Q56UN5 1328 aa29.93■■■□□ 2.38
PABPN1-202ENST00000397276 DLG5Q8TDM6 1919 aa29.93■■■□□ 2.38
PABPN1-202ENST00000397276 MFAP1P55081 439 aaKnown RBP29.92■■■□□ 2.38
PABPN1-202ENST00000397276 MIS18AQ9NYP9 233 aa29.91■■■□□ 2.38
PABPN1-202ENST00000397276 FOXO3O43524 673 aa29.91■■■□□ 2.38
PABPN1-202ENST00000397276 TBC1D32Q96NH3 1257 aa29.91■■■□□ 2.38
PABPN1-202ENST00000397276 NUCB1Q02818 461 aa29.9■■■□□ 2.38
PABPN1-202ENST00000397276 KCNA6P17658 529 aa29.89■■■□□ 2.38
PABPN1-202ENST00000397276 ANKRD45Q5TZF3 282 aa29.89■■■□□ 2.38
PABPN1-202ENST00000397276 AMPHP49418 695 aa29.88■■■□□ 2.37
PABPN1-202ENST00000397276 CHD1LQ86WJ1 897 aa29.87■■■□□ 2.37
PABPN1-202ENST00000397276 NRKQ7Z2Y5 1582 aa29.87■■■□□ 2.37
PABPN1-202ENST00000397276 PTCH1Q13635 1447 aa29.87■■■□□ 2.37
PABPN1-202ENST00000397276 SLKQ9H2G2 1235 aaPredicted RBP29.87■■■□□ 2.37
PABPN1-202ENST00000397276 BECN1Q14457 450 aa29.86■■■□□ 2.37
PABPN1-202ENST00000397276 RBM33Q96EV2 1170 aaKnown RBP29.86■■■□□ 2.37
PABPN1-202ENST00000397276 ABCC4O15439 1325 aa29.86■■■□□ 2.37
PABPN1-202ENST00000397276 NLRP6P59044 892 aa29.86■■■□□ 2.37
PABPN1-202ENST00000397276 USP31Q70CQ4 1352 aa29.86■■■□□ 2.37
PABPN1-202ENST00000397276 TOPAZ1Q8N9V7 1692 aa29.86■■■□□ 2.37
PABPN1-202ENST00000397276 SSH2Q76I76 1423 aa29.85■■■□□ 2.37
PABPN1-202ENST00000397276 EIF5BO60841 1220 aaKnown RBP29.85■■■□□ 2.37
PABPN1-202ENST00000397276 PEAK1Q9H792 1746 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 ARHGAP23Q9P227 1491 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 SIRT2Q8IXJ6 389 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 API5Q9BZZ5 524 aaKnown RBP29.84■■■□□ 2.37
PABPN1-202ENST00000397276 SLIT1O75093 1534 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 TTC21AQ8NDW8 1320 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 CHL1O00533 1208 aa29.84■■■□□ 2.37
PABPN1-202ENST00000397276 MTHFSDQ2M296 383 aaKnown RBP29.83■■■□□ 2.37
PABPN1-202ENST00000397276 CHMP4BQ9H444 224 aaKnown RBP29.82■■■□□ 2.36
PABPN1-202ENST00000397276 PIK3R4Q99570 1358 aa29.81■■■□□ 2.36
PABPN1-202ENST00000397276 C14orf37Q86TY3 774 aa29.81■■■□□ 2.36
PABPN1-202ENST00000397276 C22orf23Q9BZE7 217 aa29.81■■■□□ 2.36
PABPN1-202ENST00000397276 EYA1Q99502 592 aa29.81■■■□□ 2.36
PABPN1-202ENST00000397276 SPRYD3Q8NCJ5 442 aa29.8■■■□□ 2.36
PABPN1-202ENST00000397276 RTF1Q92541 710 aaKnown RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms