RNA–Protein interactions for RNA: ENST00000397223.4

FOXRED2-203, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-203ENST00000397223 GCP02774 474 aa22.48■■□□□ 1.19
FOXRED2-203ENST00000397223 ROBO1Q9Y6N7 1651 aa22.47■■□□□ 1.19
FOXRED2-203ENST00000397223 AMPHP49418 695 aa22.47■■□□□ 1.19
FOXRED2-203ENST00000397223 SPATA31A3Q5VYP0 1347 aa22.47■■□□□ 1.19
FOXRED2-203ENST00000397223 TNS3Q68CZ2 1445 aa22.46■■□□□ 1.19
FOXRED2-203ENST00000397223 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
FOXRED2-203ENST00000397223 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
FOXRED2-203ENST00000397223 SOS2Q07890 1332 aaPredicted RBP22.46■■□□□ 1.19
FOXRED2-203ENST00000397223 HOXC9P31274 260 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 USP19O94966 1318 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 SLIT3O75094 1523 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 PLEKHF1Q96S99 279 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
FOXRED2-203ENST00000397223 SBNO1A3KN83 1393 aa22.44■■□□□ 1.18
FOXRED2-203ENST00000397223 LTV1Q96GA3 475 aaPredicted RBP22.44■■□□□ 1.18
FOXRED2-203ENST00000397223 FLT4P35916 1363 aa22.43■■□□□ 1.18
FOXRED2-203ENST00000397223 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
FOXRED2-203ENST00000397223 RUNDC1Q96C34 613 aa22.42■■□□□ 1.18
FOXRED2-203ENST00000397223 RSPH6AQ9H0K4 717 aa22.42■■□□□ 1.18
FOXRED2-203ENST00000397223 CRYBG1Q9Y4K1 1723 aa22.41■■□□□ 1.18
FOXRED2-203ENST00000397223 PIP4K2BP78356 416 aa22.41■■□□□ 1.18
FOXRED2-203ENST00000397223 PHRF1Q9P1Y6 1649 aaKnown RBP22.41■■□□□ 1.18
FOXRED2-203ENST00000397223 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
FOXRED2-203ENST00000397223 RGPD5Q99666 1765 aa22.41■■□□□ 1.18
FOXRED2-203ENST00000397223 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
FOXRED2-203ENST00000397223 AXIN2Q9Y2T1 843 aa22.4■■□□□ 1.18
FOXRED2-203ENST00000397223 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
FOXRED2-203ENST00000397223 ARHGEF25Q86VW2 580 aa22.4■■□□□ 1.18
FOXRED2-203ENST00000397223 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.18
FOXRED2-203ENST00000397223 RGPD1P0DJD0 1748 aa22.39■■□□□ 1.17
FOXRED2-203ENST00000397223 RGPD2P0DJD1 1756 aa22.38■■□□□ 1.17
FOXRED2-203ENST00000397223 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
FOXRED2-203ENST00000397223 SPINK5Q9NQ38 1064 aaPredicted RBP22.38■■□□□ 1.17
FOXRED2-203ENST00000397223 EYA1Q99502 592 aa22.37■■□□□ 1.17
FOXRED2-203ENST00000397223 CHRNA2Q15822 529 aa22.36■■□□□ 1.17
FOXRED2-203ENST00000397223 USHBP1Q8N6Y0 703 aa22.36■■□□□ 1.17
FOXRED2-203ENST00000397223 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
FOXRED2-203ENST00000397223 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
FOXRED2-203ENST00000397223 IP6K1Q92551 441 aa22.36■■□□□ 1.17
FOXRED2-203ENST00000397223 FCHSD2O94868 740 aa22.35■■□□□ 1.17
FOXRED2-203ENST00000397223 LRRC59Q96AG4 307 aaKnown RBP22.35■■□□□ 1.17
FOXRED2-203ENST00000397223 ARHGEF10O15013 1369 aa22.33■■□□□ 1.17
FOXRED2-203ENST00000397223 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
FOXRED2-203ENST00000397223 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
FOXRED2-203ENST00000397223 WWC1Q8IX03 1113 aa22.32■■□□□ 1.16
FOXRED2-203ENST00000397223 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 IPO9Q96P70 1041 aaKnown RBP22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 ABCA3Q99758 1704 aa22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 NBPF6Q5VWK0 638 aa22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 NBPF4Q96M43 638 aa22.31■■□□□ 1.16
FOXRED2-203ENST00000397223 MAPK8IP3Q9UPT6 1336 aa22.3■■□□□ 1.16
FOXRED2-203ENST00000397223 RTL1A6NKG5 1358 aa22.3■■□□□ 1.16
FOXRED2-203ENST00000397223 IGSF1Q8N6C5 1336 aa22.3■■□□□ 1.16
FOXRED2-203ENST00000397223 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
FOXRED2-203ENST00000397223 COL18A1P39060 1754 aa22.3■■□□□ 1.16
FOXRED2-203ENST00000397223 NBR1Q14596 966 aa22.29■■□□□ 1.16
FOXRED2-203ENST00000397223 RTL5Q5HYW3 569 aaPredicted RBP22.29■■□□□ 1.16
FOXRED2-203ENST00000397223 TRIM35Q9UPQ4 493 aa22.29■■□□□ 1.16
FOXRED2-203ENST00000397223 AHDC1Q5TGY3 1603 aaPredicted RBP22.29■■□□□ 1.16
FOXRED2-203ENST00000397223 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
FOXRED2-203ENST00000397223 TOM1O60784 492 aa22.28■■□□□ 1.16
FOXRED2-203ENST00000397223 PHLPP1O60346 1717 aa22.27■■□□□ 1.16
FOXRED2-203ENST00000397223 RIPK4P57078 832 aa22.27■■□□□ 1.16
FOXRED2-203ENST00000397223 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
FOXRED2-203ENST00000397223 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
FOXRED2-203ENST00000397223 CERKQ8TCT0 537 aa22.25■■□□□ 1.15
FOXRED2-203ENST00000397223 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
FOXRED2-203ENST00000397223 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
FOXRED2-203ENST00000397223 COL16A1Q07092 1604 aaPredicted RBP22.25■■□□□ 1.15
FOXRED2-203ENST00000397223 GOLGA2Q08379 1002 aa22.25■■□□□ 1.15
FOXRED2-203ENST00000397223 KDRP35968 1356 aa22.24■■□□□ 1.15
FOXRED2-203ENST00000397223 FAM83GA6ND36 823 aa22.24■■□□□ 1.15
FOXRED2-203ENST00000397223 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
FOXRED2-203ENST00000397223 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
FOXRED2-203ENST00000397223 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
FOXRED2-203ENST00000397223 ERBB3P21860 1342 aa22.23■■□□□ 1.15
FOXRED2-203ENST00000397223 DCTN1Q14203 1278 aa22.23■■□□□ 1.15
FOXRED2-203ENST00000397223 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
FOXRED2-203ENST00000397223 NFE2L2Q16236 605 aa22.22■■□□□ 1.15
FOXRED2-203ENST00000397223 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
FOXRED2-203ENST00000397223 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
FOXRED2-203ENST00000397223 MTHFSDQ2M296 383 aaKnown RBP22.21■■□□□ 1.15
FOXRED2-203ENST00000397223 CAMTA1Q9Y6Y1 1673 aa22.2■■□□□ 1.15
FOXRED2-203ENST00000397223 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
FOXRED2-203ENST00000397223 CPDO75976 1380 aa22.2■■□□□ 1.14
FOXRED2-203ENST00000397223 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
FOXRED2-203ENST00000397223 NEFMP07197 916 aa22.18■■□□□ 1.14
FOXRED2-203ENST00000397223 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
FOXRED2-203ENST00000397223 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
FOXRED2-203ENST00000397223 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
FOXRED2-203ENST00000397223 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
FOXRED2-203ENST00000397223 MCM10Q7L590 875 aa22.15■■□□□ 1.14
FOXRED2-203ENST00000397223 COL22A1Q8NFW1 1626 aaPredicted RBP22.14■■□□□ 1.14
FOXRED2-203ENST00000397223 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
FOXRED2-203ENST00000397223 NGEFQ8N5V2 710 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms