RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 PKP1Q13835 747 aa18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 INTS3Q68E01 1043 aaKnown RBP18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
RAPGEF4-201ENST00000397081 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 DTNBO60941 627 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 NUCB2P80303 420 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 CCDC173Q0VFZ6 552 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
RAPGEF4-201ENST00000397081 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 KIDINS220Q9ULH0 1771 aa18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 MCM10Q7L590 875 aa18.05■□□□□ 0.48
RAPGEF4-201ENST00000397081 NME9Q86XW9 330 aa18.04■□□□□ 0.48
RAPGEF4-201ENST00000397081 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
RAPGEF4-201ENST00000397081 COG3Q96JB2 828 aa18.04■□□□□ 0.48
RAPGEF4-201ENST00000397081 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
RAPGEF4-201ENST00000397081 EXOC6BQ9Y2D4 811 aa18.04■□□□□ 0.48
RAPGEF4-201ENST00000397081 RABEP1Q15276 862 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 F6X3S4 739 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 FCHSD2O94868 740 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZSCAN30Q86W11 494 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
RAPGEF4-201ENST00000397081 A0A1W2PP64 1363 aa18.02■□□□□ 0.48
RAPGEF4-201ENST00000397081 ZBTB7BO15156 539 aaPredicted RBP18.02■□□□□ 0.48
RAPGEF4-201ENST00000397081 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
RAPGEF4-201ENST00000397081 RRP9O43818 475 aaKnown RBP18.02■□□□□ 0.48
RAPGEF4-201ENST00000397081 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.48
RAPGEF4-201ENST00000397081 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.47
RAPGEF4-201ENST00000397081 VAMP4O75379 141 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 REC8O95072 547 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 SYNMO15061 1565 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 MCCP23508 829 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 TAOK2Q9UL54 1235 aa18.01■□□□□ 0.47
RAPGEF4-201ENST00000397081 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
RAPGEF4-201ENST00000397081 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
RAPGEF4-201ENST00000397081 SNX21Q969T3 373 aa18■□□□□ 0.47
RAPGEF4-201ENST00000397081 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
RAPGEF4-201ENST00000397081 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
RAPGEF4-201ENST00000397081 TRPM2O94759 1503 aa18■□□□□ 0.47
RAPGEF4-201ENST00000397081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 MRPL50Q8N5N7 158 aaKnown RBP17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 ZSCAN23Q3MJ62 389 aa17.99■□□□□ 0.47
RAPGEF4-201ENST00000397081 HMMRO75330 724 aa17.98■□□□□ 0.47
RAPGEF4-201ENST00000397081 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
RAPGEF4-201ENST00000397081 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF4-201ENST00000397081 SDSP20132 328 aa17.98■□□□□ 0.47
RAPGEF4-201ENST00000397081 TET3O43151 1660 aa17.98■□□□□ 0.47
RAPGEF4-201ENST00000397081 CEP152O94986 1710 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 MEIS3Q99687 375 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 ISY1Q9ULR0 285 aaKnown RBP17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 ABCC11Q96J66 1382 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 STK31Q9BXU1 1019 aa17.97■□□□□ 0.47
RAPGEF4-201ENST00000397081 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 PLEKHM2Q8IWE5 1019 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 KCNJ4P48050 445 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 UQCRHLA0A096LP55 91 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 UQCRHP07919 91 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 AEBP1Q8IUX7 1158 aa17.96■□□□□ 0.47
RAPGEF4-201ENST00000397081 RBSNQ9H1K0 784 aa17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 ZNF830Q96NB3 372 aaPredicted RBP17.95■□□□□ 0.46
RAPGEF4-201ENST00000397081 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 TSPYL4Q9UJ04 414 aa17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 ABCC3O15438 1527 aa17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 TPM2P07951 284 aa17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 TTC22Q5TAA0 569 aa17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 PRDM10Q9NQV6 1147 aa17.94■□□□□ 0.46
RAPGEF4-201ENST00000397081 NUTM2GQ5VZR2 741 aa17.93■□□□□ 0.46
RAPGEF4-201ENST00000397081 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
RAPGEF4-201ENST00000397081 SPHKAPQ2M3C7 1700 aa17.93■□□□□ 0.46
RAPGEF4-201ENST00000397081 ERC2O15083 957 aa17.93■□□□□ 0.46
RAPGEF4-201ENST00000397081 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
RAPGEF4-201ENST00000397081 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms