RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 DEF6Q9H4E7 631 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 STARD3NLO95772 234 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 UBAC1Q9BSL1 405 aa20.71■□□□□ 0.91
MCF2L-208ENST00000397030 SEPT7Q16181 437 aaKnown RBP20.7■□□□□ 0.9
MCF2L-208ENST00000397030 TEX35Q5T0J7 233 aa20.7■□□□□ 0.9
MCF2L-208ENST00000397030 AACSQ86V21 672 aa20.7■□□□□ 0.9
MCF2L-208ENST00000397030 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
MCF2L-208ENST00000397030 KINO60870 393 aaKnown RBP20.7■□□□□ 0.9
MCF2L-208ENST00000397030 CLEC11AQ9Y240 323 aa20.7■□□□□ 0.9
MCF2L-208ENST00000397030 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
MCF2L-208ENST00000397030 C22orf23Q9BZE7 217 aa20.7■□□□□ 0.9
MCF2L-208ENST00000397030 EXOSC9Q06265 439 aaKnown RBP20.69■□□□□ 0.9
MCF2L-208ENST00000397030 ZSCAN25Q6NSZ9 544 aa20.69■□□□□ 0.9
MCF2L-208ENST00000397030 TRMT1LQ7Z2T5 733 aaKnown RBP20.69■□□□□ 0.9
MCF2L-208ENST00000397030 NOB1Q9ULX3 412 aaKnown RBP20.69■□□□□ 0.9
MCF2L-208ENST00000397030 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
MCF2L-208ENST00000397030 CNTLNQ9NXG0 1405 aa20.69■□□□□ 0.9
MCF2L-208ENST00000397030 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-208ENST00000397030 ZNF622Q969S3 477 aaKnown RBP eCLIP20.69■□□□□ 0.9
MCF2L-208ENST00000397030 TRIM21P19474 475 aaKnown RBP20.68■□□□□ 0.9
MCF2L-208ENST00000397030 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
MCF2L-208ENST00000397030 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-208ENST00000397030 DHX37Q8IY37 1157 aaKnown RBP20.68■□□□□ 0.9
MCF2L-208ENST00000397030 MAP7D2Q96T17 732 aa20.67■□□□□ 0.9
MCF2L-208ENST00000397030 DESP17661 470 aa20.67■□□□□ 0.9
MCF2L-208ENST00000397030 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
MCF2L-208ENST00000397030 RTEL1-TNFRSF6BF6WH68 1400 aa20.67■□□□□ 0.9
MCF2L-208ENST00000397030 SLC4A8Q2Y0W8 1093 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 NUCB2P80303 420 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 TTC16Q8NEE8 873 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 ACBD3Q9H3P7 528 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 MYOM3Q5VTT5 1437 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 PPP4R3AQ6IN85 833 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 POGZQ7Z3K3 1410 aa20.66■□□□□ 0.9
MCF2L-208ENST00000397030 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 NEK4P51957 841 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 TNIP1Q15025 636 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 TCP11L2Q8N4U5 519 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 ENOX2Q16206 610 aaKnown RBP20.65■□□□□ 0.9
MCF2L-208ENST00000397030 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
MCF2L-208ENST00000397030 STIM1Q13586 685 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 HSP90B2PQ58FF3 399 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 NOM1Q5C9Z4 860 aaKnown RBP20.65■□□□□ 0.9
MCF2L-208ENST00000397030 DRC1Q96MC2 740 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 SRCIN1Q9C0H9 1055 aa20.65■□□□□ 0.9
MCF2L-208ENST00000397030 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.9
MCF2L-208ENST00000397030 TRIM5Q9C035 493 aa20.64■□□□□ 0.9
MCF2L-208ENST00000397030 MINDY4BA8MYZ0 360 aa20.64■□□□□ 0.9
MCF2L-208ENST00000397030 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.9
MCF2L-208ENST00000397030 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.9
MCF2L-208ENST00000397030 DZIP1Q86YF9 867 aaKnown RBP20.64■□□□□ 0.89
MCF2L-208ENST00000397030 ZNHIT6Q9NWK9 470 aaKnown RBP20.64■□□□□ 0.89
MCF2L-208ENST00000397030 CAVIN4Q5BKX8 364 aa20.64■□□□□ 0.89
MCF2L-208ENST00000397030 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
MCF2L-208ENST00000397030 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
MCF2L-208ENST00000397030 FIBPO43427 364 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 SERPINC1P01008 464 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 CCDC181Q5TID7 509 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 MKNK2Q9HBH9 465 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 CEP126Q9P2H0 1117 aa20.63■□□□□ 0.89
MCF2L-208ENST00000397030 PRG4Q92954 1404 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-208ENST00000397030 ARGLU1Q9NWB6 273 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-208ENST00000397030 PSMD1Q99460 953 aa20.62■□□□□ 0.89
MCF2L-208ENST00000397030 SEC63Q9UGP8 760 aaKnown RBP20.62■□□□□ 0.89
MCF2L-208ENST00000397030 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
MCF2L-208ENST00000397030 BCAR3O75815 825 aa20.62■□□□□ 0.89
MCF2L-208ENST00000397030 BMP2KQ9NSY1 1161 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-208ENST00000397030 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
MCF2L-208ENST00000397030 ZRSR2Q15696 482 aaKnown RBP20.62■□□□□ 0.89
MCF2L-208ENST00000397030 LRRCC1Q9C099 1032 aa20.61■□□□□ 0.89
MCF2L-208ENST00000397030 DHX8Q14562 1220 aaKnown RBP20.61■□□□□ 0.89
MCF2L-208ENST00000397030 ME1P48163 572 aa20.61■□□□□ 0.89
MCF2L-208ENST00000397030 UBA5Q9GZZ9 404 aa20.61■□□□□ 0.89
MCF2L-208ENST00000397030 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
MCF2L-208ENST00000397030 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
MCF2L-208ENST00000397030 FGD5Q6ZNL6 1462 aa20.6■□□□□ 0.89
MCF2L-208ENST00000397030 ZNF692Q9BU19 519 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-208ENST00000397030 PLCD4Q9BRC7 762 aa20.6■□□□□ 0.89
MCF2L-208ENST00000397030 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
MCF2L-208ENST00000397030 ERLIN2O94905 339 aa20.59■□□□□ 0.89
MCF2L-208ENST00000397030 FAM13BQ9NYF5 915 aa20.59■□□□□ 0.89
MCF2L-208ENST00000397030 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
MCF2L-208ENST00000397030 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
MCF2L-208ENST00000397030 SPC24Q8NBT2 197 aa20.59■□□□□ 0.89
MCF2L-208ENST00000397030 TAX1BP1Q86VP1 789 aa20.58■□□□□ 0.89
MCF2L-208ENST00000397030 SRGAP3O43295 1099 aa20.58■□□□□ 0.89
MCF2L-208ENST00000397030 CWC27Q6UX04 472 aaKnown RBP20.58■□□□□ 0.89
MCF2L-208ENST00000397030 FEZ1Q99689 392 aa20.58■□□□□ 0.89
MCF2L-208ENST00000397030 MYD88Q99836 296 aa20.58■□□□□ 0.88
MCF2L-208ENST00000397030 HSP90AA2PQ14568 343 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-208ENST00000397030 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
MCF2L-208ENST00000397030 CENPHQ9H3R5 247 aa20.57■□□□□ 0.88
MCF2L-208ENST00000397030 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-208ENST00000397030 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
MCF2L-208ENST00000397030 PPFIBP1Q86W92 1011 aa20.57■□□□□ 0.88
MCF2L-208ENST00000397030 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
MCF2L-208ENST00000397030 ANKRD50Q9ULJ7 1429 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms