RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.74■■■□□ 2.35
CSNK1E-203ENST00000396832 NEXMIFQ5QGS0 1516 aa29.74■■■□□ 2.35
CSNK1E-203ENST00000396832 RBM10P98175 930 aaKnown RBP29.73■■■□□ 2.35
CSNK1E-203ENST00000396832 APBB1O00213 710 aa29.72■■■□□ 2.35
CSNK1E-203ENST00000396832 KLHL40Q2TBA0 621 aa29.72■■■□□ 2.35
CSNK1E-203ENST00000396832 ZBTB7BO15156 539 aaPredicted RBP29.72■■■□□ 2.35
CSNK1E-203ENST00000396832 LRRC7Q96NW7 1537 aa29.72■■■□□ 2.35
CSNK1E-203ENST00000396832 SIRT2Q8IXJ6 389 aa29.71■■■□□ 2.35
CSNK1E-203ENST00000396832 CDK19Q9BWU1 502 aa29.71■■■□□ 2.35
CSNK1E-203ENST00000396832 IL16Q14005 1332 aa29.71■■■□□ 2.35
CSNK1E-203ENST00000396832 BMP2KLQ5H9B9 411 aa29.71■■■□□ 2.35
CSNK1E-203ENST00000396832 HDGFL2Q7Z4V5 671 aaPredicted RBP29.71■■■□□ 2.35
CSNK1E-203ENST00000396832 GAS2L2Q8NHY3 880 aa29.7■■■□□ 2.34
CSNK1E-203ENST00000396832 EMILIN1Q9Y6C2 1016 aa29.7■■■□□ 2.34
CSNK1E-203ENST00000396832 HECW2Q9P2P5 1572 aa29.7■■■□□ 2.34
CSNK1E-203ENST00000396832 FAM83GA6ND36 823 aa29.69■■■□□ 2.34
CSNK1E-203ENST00000396832 POGZQ7Z3K3 1410 aa29.69■■■□□ 2.34
CSNK1E-203ENST00000396832 BAG4O95429 457 aaKnown RBP29.69■■■□□ 2.34
CSNK1E-203ENST00000396832 DCTN1Q14203 1278 aa29.69■■■□□ 2.34
CSNK1E-203ENST00000396832 CD163L1Q9NR16 1453 aa29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 IBTKQ9P2D0 1353 aaPredicted RBP29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 VAMP4O75379 141 aa29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 TERF1P54274 439 aa29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 ALDH1L2Q3SY69 923 aa29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 CLEC17AQ6ZS10 378 aa29.68■■■□□ 2.34
CSNK1E-203ENST00000396832 ZRANB1Q9UGI0 708 aa29.67■■■□□ 2.34
CSNK1E-203ENST00000396832 MRPL50Q8N5N7 158 aaKnown RBP29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 POLKQ9UBT6 870 aa29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 MYO5BQ9ULV0 1848 aa29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 WAPLQ7Z5K2 1190 aa29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 MBIPQ9NS73 344 aa29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 R3HCC1Q9Y3T6 440 aaKnown RBP29.66■■■□□ 2.34
CSNK1E-203ENST00000396832 CALD1Q05682 793 aaKnown RBP29.65■■■□□ 2.34
CSNK1E-203ENST00000396832 PUS7Q96PZ0 661 aaKnown RBP29.64■■■□□ 2.34
CSNK1E-203ENST00000396832 CFAP74Q9C0B2 1584 aa29.64■■■□□ 2.34
CSNK1E-203ENST00000396832 FCHSD2O94868 740 aa29.64■■■□□ 2.34
CSNK1E-203ENST00000396832 FAM13BQ9NYF5 915 aa29.64■■■□□ 2.34
CSNK1E-203ENST00000396832 C16orf71Q8IYS4 520 aaPredicted RBP29.64■■■□□ 2.33
CSNK1E-203ENST00000396832 FBXO31Q5XUX0 539 aaPredicted RBP29.63■■■□□ 2.33
CSNK1E-203ENST00000396832 GSPT1P15170 499 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-203ENST00000396832 C8orf58Q8NAV2 365 aa29.62■■■□□ 2.33
CSNK1E-203ENST00000396832 NCLP19338 710 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-203ENST00000396832 ZNF445P59923 1031 aa29.62■■■□□ 2.33
CSNK1E-203ENST00000396832 PTPRMP28827 1452 aa29.61■■■□□ 2.33
CSNK1E-203ENST00000396832 FAM69CQ0P6D2 419 aa29.61■■■□□ 2.33
CSNK1E-203ENST00000396832 TWISTNBQ3B726 338 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-203ENST00000396832 GCC1Q96CN9 775 aa29.61■■■□□ 2.33
CSNK1E-203ENST00000396832 NFE2L2Q16236 605 aa29.6■■■□□ 2.33
CSNK1E-203ENST00000396832 HS1BP3Q53T59 392 aa29.6■■■□□ 2.33
CSNK1E-203ENST00000396832 MCTP1Q6DN14 999 aa29.6■■■□□ 2.33
CSNK1E-203ENST00000396832 OTUD7AQ8TE49 926 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-203ENST00000396832 KRT24Q2M2I5 525 aa29.59■■■□□ 2.33
CSNK1E-203ENST00000396832 CAVIN1Q6NZI2 390 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-203ENST00000396832 STAG3Q9UJ98 1225 aa29.59■■■□□ 2.33
CSNK1E-203ENST00000396832 RRS1Q15050 365 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-203ENST00000396832 NOL7Q9UMY1 257 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-203ENST00000396832 PIK3C2BO00750 1634 aa29.58■■■□□ 2.33
CSNK1E-203ENST00000396832 ZSCAN23Q3MJ62 389 aa29.58■■■□□ 2.33
CSNK1E-203ENST00000396832 NME9Q86XW9 330 aa29.58■■■□□ 2.33
CSNK1E-203ENST00000396832 YTHDC2Q9H6S0 1430 aaKnown RBP29.57■■■□□ 2.32
CSNK1E-203ENST00000396832 MAP7D2Q96T17 732 aa29.57■■■□□ 2.32
CSNK1E-203ENST00000396832 FAM135BQ49AJ0 1406 aa29.57■■■□□ 2.32
CSNK1E-203ENST00000396832 MED14O60244 1454 aa29.57■■■□□ 2.32
CSNK1E-203ENST00000396832 PKP1Q13835 747 aa29.57■■■□□ 2.32
CSNK1E-203ENST00000396832 NCKAP5LQ9HCH0 1330 aa29.56■■■□□ 2.32
CSNK1E-203ENST00000396832 RBSNQ9H1K0 784 aa29.56■■■□□ 2.32
CSNK1E-203ENST00000396832 ZNF500O60304 480 aaPredicted RBP29.56■■■□□ 2.32
CSNK1E-203ENST00000396832 XPCQ01831 940 aaPredicted RBP29.56■■■□□ 2.32
CSNK1E-203ENST00000396832 PNPLA6Q8IY17 1366 aa29.55■■■□□ 2.32
CSNK1E-203ENST00000396832 CHAMP1Q96JM3 812 aa29.55■■■□□ 2.32
CSNK1E-203ENST00000396832 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.55■■■□□ 2.32
CSNK1E-203ENST00000396832 SMARCA5O60264 1052 aaPredicted RBP29.55■■■□□ 2.32
CSNK1E-203ENST00000396832 CDC45O75419 566 aa29.55■■■□□ 2.32
CSNK1E-203ENST00000396832 MLH3Q9UHC1 1453 aa29.54■■■□□ 2.32
CSNK1E-203ENST00000396832 PRDM4Q9UKN5 801 aa29.54■■■□□ 2.32
CSNK1E-203ENST00000396832 LMBRD1Q9NUN5 540 aa29.53■■■□□ 2.32
CSNK1E-203ENST00000396832 PDLIM2Q96JY6 352 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 UQCRHLA0A096LP55 91 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 UQCRHP07919 91 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 GNAI1P63096 354 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 PLEKHM2Q8IWE5 1019 aa29.52■■■□□ 2.32
CSNK1E-203ENST00000396832 FOXD4L5Q5VV16 416 aaPredicted RBP29.51■■■□□ 2.31
CSNK1E-203ENST00000396832 FOXD4L4Q8WXT5 416 aaPredicted RBP29.51■■■□□ 2.31
CSNK1E-203ENST00000396832 MAP2P11137 1827 aaKnown RBP29.51■■■□□ 2.31
CSNK1E-203ENST00000396832 ABCC4O15439 1325 aa29.51■■■□□ 2.31
CSNK1E-203ENST00000396832 PRIM1P49642 420 aaKnown RBP29.51■■■□□ 2.31
CSNK1E-203ENST00000396832 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
CSNK1E-203ENST00000396832 NUCB2P80303 420 aa29.5■■■□□ 2.31
CSNK1E-203ENST00000396832 PTCH1Q13635 1447 aa29.49■■■□□ 2.31
CSNK1E-203ENST00000396832 IFT57Q9NWB7 429 aa29.48■■■□□ 2.31
CSNK1E-203ENST00000396832 KIF20BQ96Q89 1820 aa29.48■■■□□ 2.31
CSNK1E-203ENST00000396832 SLC52A1Q9NWF4 448 aa29.46■■■□□ 2.31
CSNK1E-203ENST00000396832 ZKSCAN5Q9Y2L8 839 aa29.46■■■□□ 2.31
CSNK1E-203ENST00000396832 ZFYVE9O95405 1425 aa29.46■■■□□ 2.31
CSNK1E-203ENST00000396832 RABEP1Q15276 862 aa29.46■■■□□ 2.31
CSNK1E-203ENST00000396832 ZGPATQ8N5A5 531 aaKnown RBP29.46■■■□□ 2.31
CSNK1E-203ENST00000396832 CYP2E1P05181 493 aaPredicted RBP29.45■■■□□ 2.31
CSNK1E-203ENST00000396832 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
CSNK1E-203ENST00000396832 SOX12O15370 315 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms