RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 HDGFL2Q7Z4V5 671 aaPredicted RBP11.82□□□□□ -0.52
NDE1-201ENST00000396354 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
NDE1-201ENST00000396354 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
NDE1-201ENST00000396354 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
NDE1-201ENST00000396354 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
NDE1-201ENST00000396354 HMOX1P09601 288 aa11.81□□□□□ -0.52
NDE1-201ENST00000396354 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
NDE1-201ENST00000396354 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
NDE1-201ENST00000396354 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
NDE1-201ENST00000396354 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
NDE1-201ENST00000396354 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
NDE1-201ENST00000396354 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
NDE1-201ENST00000396354 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
NDE1-201ENST00000396354 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
NDE1-201ENST00000396354 BECN1Q14457 450 aa11.79□□□□□ -0.52
NDE1-201ENST00000396354 RRS1Q15050 365 aaKnown RBP11.79□□□□□ -0.52
NDE1-201ENST00000396354 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
NDE1-201ENST00000396354 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
NDE1-201ENST00000396354 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
NDE1-201ENST00000396354 NGEFQ8N5V2 710 aa11.78□□□□□ -0.52
NDE1-201ENST00000396354 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
NDE1-201ENST00000396354 CEP170BQ9Y4F5 1589 aaPredicted RBP11.78□□□□□ -0.52
NDE1-201ENST00000396354 EDC4Q6P2E9 1401 aaKnown RBP11.78□□□□□ -0.52
NDE1-201ENST00000396354 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.52
NDE1-201ENST00000396354 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.77□□□□□ -0.52
NDE1-201ENST00000396354 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.52
NDE1-201ENST00000396354 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
NDE1-201ENST00000396354 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
NDE1-201ENST00000396354 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
NDE1-201ENST00000396354 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
NDE1-201ENST00000396354 RIPK4P57078 832 aa11.76□□□□□ -0.53
NDE1-201ENST00000396354 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
NDE1-201ENST00000396354 NOB1Q9ULX3 412 aaKnown RBP11.76□□□□□ -0.53
NDE1-201ENST00000396354 USP19O94966 1318 aa11.76□□□□□ -0.53
NDE1-201ENST00000396354 THEMISQ8N1K5 641 aaPredicted RBP11.76□□□□□ -0.53
NDE1-201ENST00000396354 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
NDE1-201ENST00000396354 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
NDE1-201ENST00000396354 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
NDE1-201ENST00000396354 RGPD8O14715 1765 aaPredicted RBP11.76□□□□□ -0.53
NDE1-201ENST00000396354 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 IL13P35225 146 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 PLEKHG1Q9ULL1 1385 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
NDE1-201ENST00000396354 TRIM27P14373 513 aa11.74□□□□□ -0.53
NDE1-201ENST00000396354 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
NDE1-201ENST00000396354 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
NDE1-201ENST00000396354 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
NDE1-201ENST00000396354 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
NDE1-201ENST00000396354 CDK12Q9NYV4 1490 aaPredicted RBP11.73□□□□□ -0.53
NDE1-201ENST00000396354 ARHGAP23Q9P227 1491 aa11.73□□□□□ -0.53
NDE1-201ENST00000396354 AEBP1Q8IUX7 1158 aa11.73□□□□□ -0.53
NDE1-201ENST00000396354 PANK2Q9BZ23 570 aa11.73□□□□□ -0.53
NDE1-201ENST00000396354 ACEP12821 1306 aa11.72□□□□□ -0.53
NDE1-201ENST00000396354 HDGFP51858 240 aaKnown RBP11.72□□□□□ -0.53
NDE1-201ENST00000396354 HSPA2P54652 639 aa11.72□□□□□ -0.53
NDE1-201ENST00000396354 MVPQ14764 893 aaKnown RBP11.72□□□□□ -0.53
NDE1-201ENST00000396354 SLIT1O75093 1534 aa11.72□□□□□ -0.53
NDE1-201ENST00000396354 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
NDE1-201ENST00000396354 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 C22orf23Q9BZE7 217 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 PROM2Q8N271 834 aa11.71□□□□□ -0.53
NDE1-201ENST00000396354 FCHSD2O94868 740 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 TTC21BQ7Z4L5 1316 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 AATKQ6ZMQ8 1374 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 NALCNQ8IZF0 1738 aa11.7□□□□□ -0.54
NDE1-201ENST00000396354 USP6P35125 1406 aa11.69□□□□□ -0.54
NDE1-201ENST00000396354 SSH2Q76I76 1423 aa11.69□□□□□ -0.54
NDE1-201ENST00000396354 COG3Q96JB2 828 aa11.69□□□□□ -0.54
NDE1-201ENST00000396354 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
NDE1-201ENST00000396354 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
NDE1-201ENST00000396354 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
NDE1-201ENST00000396354 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
NDE1-201ENST00000396354 DIP2AQ14689 1571 aa11.68□□□□□ -0.54
NDE1-201ENST00000396354 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
NDE1-201ENST00000396354 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
NDE1-201ENST00000396354 FOXD4L5Q5VV16 416 aaPredicted RBP11.68□□□□□ -0.54
NDE1-201ENST00000396354 FOXD4L4Q8WXT5 416 aaPredicted RBP11.68□□□□□ -0.54
NDE1-201ENST00000396354 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
NDE1-201ENST00000396354 EIF4A2Q14240 407 aaKnown RBP11.67□□□□□ -0.54
NDE1-201ENST00000396354 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
NDE1-201ENST00000396354 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
NDE1-201ENST00000396354 IL16Q14005 1332 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 ATF7IPQ6VMQ6 1270 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
NDE1-201ENST00000396354 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
NDE1-201ENST00000396354 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1595 ms