RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
HOXA3-202ENST00000396352 IL13P35225 146 aa19.72■□□□□ 0.75
HOXA3-202ENST00000396352 SNX21Q969T3 373 aa19.72■□□□□ 0.75
HOXA3-202ENST00000396352 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
HOXA3-202ENST00000396352 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
HOXA3-202ENST00000396352 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
HOXA3-202ENST00000396352 NRXN3Q9Y4C0 1643 aa19.71■□□□□ 0.75
HOXA3-202ENST00000396352 ABCC4O15439 1325 aa19.71■□□□□ 0.75
HOXA3-202ENST00000396352 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.71■□□□□ 0.75
HOXA3-202ENST00000396352 GCC1Q96CN9 775 aa19.71■□□□□ 0.75
HOXA3-202ENST00000396352 MON2Q7Z3U7 1717 aa19.71■□□□□ 0.75
HOXA3-202ENST00000396352 C1orf115Q9H7X2 142 aa19.7■□□□□ 0.74
HOXA3-202ENST00000396352 MBIPQ9NS73 344 aa19.7■□□□□ 0.74
HOXA3-202ENST00000396352 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
HOXA3-202ENST00000396352 CALD1Q05682 793 aaKnown RBP19.7■□□□□ 0.74
HOXA3-202ENST00000396352 GNAI1P63096 354 aa19.7■□□□□ 0.74
HOXA3-202ENST00000396352 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
HOXA3-202ENST00000396352 KNDC1Q76NI1 1749 aa19.69■□□□□ 0.74
HOXA3-202ENST00000396352 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
HOXA3-202ENST00000396352 KIF2CQ99661 725 aa19.69■□□□□ 0.74
HOXA3-202ENST00000396352 REREQ9P2R6 1566 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 ANKRD45Q5TZF3 282 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 TRAK2O60296 914 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 XRCC6P12956 609 aaKnown RBP eCLIP19.68■□□□□ 0.74
HOXA3-202ENST00000396352 NME9Q86XW9 330 aa19.68■□□□□ 0.74
HOXA3-202ENST00000396352 CHMP4BQ9H444 224 aaKnown RBP19.67■□□□□ 0.74
HOXA3-202ENST00000396352 GOLGA6L3A6NEY3 463 aa19.67■□□□□ 0.74
HOXA3-202ENST00000396352 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
HOXA3-202ENST00000396352 CPS1P31327 1500 aa19.66■□□□□ 0.74
HOXA3-202ENST00000396352 AKAP12Q02952 1782 aa19.66■□□□□ 0.74
HOXA3-202ENST00000396352 ZRANB1Q9UGI0 708 aa19.66■□□□□ 0.74
HOXA3-202ENST00000396352 C3P01024 1663 aa19.66■□□□□ 0.74
HOXA3-202ENST00000396352 AGLP35573 1532 aa19.66■□□□□ 0.74
HOXA3-202ENST00000396352 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
HOXA3-202ENST00000396352 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
HOXA3-202ENST00000396352 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.74
HOXA3-202ENST00000396352 CFAP44Q96MT7 982 aa19.64■□□□□ 0.74
HOXA3-202ENST00000396352 WASLO00401 505 aaPredicted RBP19.64■□□□□ 0.73
HOXA3-202ENST00000396352 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.73
HOXA3-202ENST00000396352 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
HOXA3-202ENST00000396352 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
HOXA3-202ENST00000396352 ITSN1Q15811 1721 aa19.63■□□□□ 0.73
HOXA3-202ENST00000396352 RRAGDQ9NQL2 400 aaPredicted RBP19.63■□□□□ 0.73
HOXA3-202ENST00000396352 CD2BP2O95400 341 aaKnown RBP19.62■□□□□ 0.73
HOXA3-202ENST00000396352 ARXQ96QS3 562 aa19.62■□□□□ 0.73
HOXA3-202ENST00000396352 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
HOXA3-202ENST00000396352 PANK2Q9BZ23 570 aa19.61■□□□□ 0.73
HOXA3-202ENST00000396352 METP08581 1390 aa19.61■□□□□ 0.73
HOXA3-202ENST00000396352 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
HOXA3-202ENST00000396352 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
HOXA3-202ENST00000396352 TNPO1Q92973 898 aaKnown RBP19.61■□□□□ 0.73
HOXA3-202ENST00000396352 RRS1Q15050 365 aaKnown RBP19.6■□□□□ 0.73
HOXA3-202ENST00000396352 KIF24Q5T7B8 1368 aa19.6■□□□□ 0.73
HOXA3-202ENST00000396352 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
HOXA3-202ENST00000396352 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
HOXA3-202ENST00000396352 NCKAP5LQ9HCH0 1330 aa19.6■□□□□ 0.73
HOXA3-202ENST00000396352 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
HOXA3-202ENST00000396352 API5Q9BZZ5 524 aaKnown RBP19.59■□□□□ 0.73
HOXA3-202ENST00000396352 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.73
HOXA3-202ENST00000396352 COG3Q96JB2 828 aa19.58■□□□□ 0.73
HOXA3-202ENST00000396352 GSPT1P15170 499 aaKnown RBP19.58■□□□□ 0.72
HOXA3-202ENST00000396352 DCTN1Q14203 1278 aa19.57■□□□□ 0.72
HOXA3-202ENST00000396352 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
HOXA3-202ENST00000396352 RGS12O14924 1447 aa19.57■□□□□ 0.72
HOXA3-202ENST00000396352 TSPOAP1O95153 1857 aa19.57■□□□□ 0.72
HOXA3-202ENST00000396352 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
HOXA3-202ENST00000396352 TECPR2O15040 1411 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 K7ELQ4 463 aaPredicted RBP19.56■□□□□ 0.72
HOXA3-202ENST00000396352 CDC45O75419 566 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 MRE11P49959 708 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
HOXA3-202ENST00000396352 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
HOXA3-202ENST00000396352 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
HOXA3-202ENST00000396352 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
HOXA3-202ENST00000396352 GBP4Q96PP9 640 aa19.53■□□□□ 0.72
HOXA3-202ENST00000396352 RGPD1P0DJD0 1748 aa19.53■□□□□ 0.72
HOXA3-202ENST00000396352 GRPEL1Q9HAV7 217 aa19.52■□□□□ 0.72
HOXA3-202ENST00000396352 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
HOXA3-202ENST00000396352 AEBP1Q8IUX7 1158 aa19.52■□□□□ 0.72
HOXA3-202ENST00000396352 ISY1Q9ULR0 285 aaKnown RBP19.52■□□□□ 0.72
HOXA3-202ENST00000396352 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.71
HOXA3-202ENST00000396352 FOXD4L1Q9NU39 408 aa19.52■□□□□ 0.71
HOXA3-202ENST00000396352 PEAK1Q9H792 1746 aa19.51■□□□□ 0.71
HOXA3-202ENST00000396352 PRKCSHP14314 528 aaPredicted RBP19.51■□□□□ 0.71
HOXA3-202ENST00000396352 TOPAZ1Q8N9V7 1692 aa19.51■□□□□ 0.71
HOXA3-202ENST00000396352 NALCNQ8IZF0 1738 aa19.51■□□□□ 0.71
HOXA3-202ENST00000396352 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
HOXA3-202ENST00000396352 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
HOXA3-202ENST00000396352 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
HOXA3-202ENST00000396352 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
HOXA3-202ENST00000396352 EIF4A2Q14240 407 aaKnown RBP19.5■□□□□ 0.71
HOXA3-202ENST00000396352 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
HOXA3-202ENST00000396352 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
HOXA3-202ENST00000396352 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOXA3-202ENST00000396352 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
HOXA3-202ENST00000396352 CHL1O00533 1208 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms