RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 UBE2Q2Q8WVN8 375 aa10.24□□□□□ -0.77
BDNF-206ENST00000395983 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
BDNF-206ENST00000395983 FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
BDNF-206ENST00000395983 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
BDNF-206ENST00000395983 CDK19Q9BWU1 502 aa10.23□□□□□ -0.77
BDNF-206ENST00000395983 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
BDNF-206ENST00000395983 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
BDNF-206ENST00000395983 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
BDNF-206ENST00000395983 PTPRMP28827 1452 aa10.23□□□□□ -0.77
BDNF-206ENST00000395983 ESPNB1AK53 854 aa10.23□□□□□ -0.77
BDNF-206ENST00000395983 INTS3Q68E01 1043 aaKnown RBP10.23□□□□□ -0.77
BDNF-206ENST00000395983 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
BDNF-206ENST00000395983 DDIT3P35638 169 aa10.22□□□□□ -0.77
BDNF-206ENST00000395983 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
BDNF-206ENST00000395983 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
BDNF-206ENST00000395983 IBTKQ9P2D0 1353 aaPredicted RBP10.22□□□□□ -0.77
BDNF-206ENST00000395983 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
BDNF-206ENST00000395983 ST18O60284 1047 aa10.22□□□□□ -0.77
BDNF-206ENST00000395983 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
BDNF-206ENST00000395983 TBC1D9Q6ZT07 1266 aa10.22□□□□□ -0.77
BDNF-206ENST00000395983 ABCC4O15439 1325 aa10.21□□□□□ -0.77
BDNF-206ENST00000395983 VAMP4O75379 141 aa10.21□□□□□ -0.77
BDNF-206ENST00000395983 CABP1Q9NZU7 370 aa10.21□□□□□ -0.77
BDNF-206ENST00000395983 REC8O95072 547 aa10.21□□□□□ -0.78
BDNF-206ENST00000395983 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.78
BDNF-206ENST00000395983 HMMRO75330 724 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 KLHL40Q2TBA0 621 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 CLEC17AQ6ZS10 378 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 RPAP2Q8IXW5 612 aaPredicted RBP10.2□□□□□ -0.78
BDNF-206ENST00000395983 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 DIP2CQ9Y2E4 1556 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 SIGLEC1Q9BZZ2 1709 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
BDNF-206ENST00000395983 EDC4Q6P2E9 1401 aaKnown RBP10.2□□□□□ -0.78
BDNF-206ENST00000395983 CDK12Q9NYV4 1490 aaPredicted RBP10.2□□□□□ -0.78
BDNF-206ENST00000395983 TPM2P07951 284 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 MSNP26038 577 aaKnown RBP10.19□□□□□ -0.78
BDNF-206ENST00000395983 COG3Q96JB2 828 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 PANK2Q9BZ23 570 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 POLKQ9UBT6 870 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 AATKQ6ZMQ8 1374 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.19□□□□□ -0.78
BDNF-206ENST00000395983 CD163L1Q9NR16 1453 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 PREX1Q8TCU6 1659 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 TMEM131LA2VDJ0 1609 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 RRP9O43818 475 aaKnown RBP10.19□□□□□ -0.78
BDNF-206ENST00000395983 ARHGEF40Q8TER5 1519 aa10.19□□□□□ -0.78
BDNF-206ENST00000395983 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
BDNF-206ENST00000395983 HDGFP51858 240 aaKnown RBP10.18□□□□□ -0.78
BDNF-206ENST00000395983 ALKQ9UM73 1620 aa10.18□□□□□ -0.78
BDNF-206ENST00000395983 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 DCTPP1Q9H773 170 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 MBIPQ9NS73 344 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 HMOX1P09601 288 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 MCCP23508 829 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 MCM2P49736 904 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
BDNF-206ENST00000395983 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 CPSF1Q10570 1443 aaKnown RBP10.17□□□□□ -0.78
BDNF-206ENST00000395983 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.17□□□□□ -0.78
BDNF-206ENST00000395983 PTPRCP08575 1304 aa10.17□□□□□ -0.78
BDNF-206ENST00000395983 RIMS2Q9UQ26 1411 aa10.16□□□□□ -0.78
BDNF-206ENST00000395983 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
BDNF-206ENST00000395983 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
BDNF-206ENST00000395983 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
BDNF-206ENST00000395983 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
BDNF-206ENST00000395983 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
BDNF-206ENST00000395983 IL13P35225 146 aa10.15□□□□□ -0.78
BDNF-206ENST00000395983 ZSCAN30Q86W11 494 aa10.15□□□□□ -0.78
BDNF-206ENST00000395983 MAP2P11137 1827 aaKnown RBP10.15□□□□□ -0.78
BDNF-206ENST00000395983 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.78
BDNF-206ENST00000395983 KIF2CQ99661 725 aa10.15□□□□□ -0.78
BDNF-206ENST00000395983 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.79
BDNF-206ENST00000395983 OSCARQ8IYS5 282 aa10.15□□□□□ -0.79
BDNF-206ENST00000395983 PPP1R9BQ96SB3 815 aa10.15□□□□□ -0.79
BDNF-206ENST00000395983 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.79
BDNF-206ENST00000395983 MYO5BQ9ULV0 1848 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
BDNF-206ENST00000395983 SSFA2P28290 1259 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 SYAP1Q96A49 352 aaPredicted RBP10.14□□□□□ -0.79
BDNF-206ENST00000395983 MBD3O95983 291 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 ZNF445P59923 1031 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 KIAA0232Q92628 1395 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
BDNF-206ENST00000395983 ERC2O15083 957 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 PHACTR3Q96KR7 559 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
BDNF-206ENST00000395983 MCTP1Q6DN14 999 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 TERF1P54274 439 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 USP26Q9BXU7 913 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
BDNF-206ENST00000395983 CCDC61Q9Y6R9 512 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 YEATS2Q9ULM3 1422 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
BDNF-206ENST00000395983 SIRT1Q96EB6 747 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 EMILIN1Q9Y6C2 1016 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 PHF14O94880 888 aa10.12□□□□□ -0.79
BDNF-206ENST00000395983 CSPP1Q1MSJ5 1256 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms