RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ANKRD45Q5TZF3 282 aa10.8□□□□□ -0.68
BDNF-204ENST00000395980 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
BDNF-204ENST00000395980 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
BDNF-204ENST00000395980 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
BDNF-204ENST00000395980 RABEP1Q15276 862 aa10.79□□□□□ -0.68
BDNF-204ENST00000395980 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
BDNF-204ENST00000395980 VAMP4O75379 141 aa10.79□□□□□ -0.68
BDNF-204ENST00000395980 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
BDNF-204ENST00000395980 CD2BP2O95400 341 aaKnown RBP10.78□□□□□ -0.68
BDNF-204ENST00000395980 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
BDNF-204ENST00000395980 GNAI1P63096 354 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 NUCB2P80303 420 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 GGT6Q6P531 493 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 ZNF445P59923 1031 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 HS1BP3Q53T59 392 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 SLC52A1Q9NWF4 448 aa10.78□□□□□ -0.68
BDNF-204ENST00000395980 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.68
BDNF-204ENST00000395980 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.68
BDNF-204ENST00000395980 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.68
BDNF-204ENST00000395980 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.68
BDNF-204ENST00000395980 ARHGEF40Q8TER5 1519 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 SSFA2P28290 1259 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 TERF1P54274 439 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 ATP7BP35670 1465 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 YTHDC2Q9H6S0 1430 aaKnown RBP10.77□□□□□ -0.69
BDNF-204ENST00000395980 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
BDNF-204ENST00000395980 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
BDNF-204ENST00000395980 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
BDNF-204ENST00000395980 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
BDNF-204ENST00000395980 DDX49Q9Y6V7 483 aaKnown RBP10.76□□□□□ -0.69
BDNF-204ENST00000395980 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
BDNF-204ENST00000395980 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
BDNF-204ENST00000395980 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
BDNF-204ENST00000395980 CDK12Q9NYV4 1490 aaPredicted RBP10.75□□□□□ -0.69
BDNF-204ENST00000395980 DLC1Q96QB1 1528 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 NEO1Q92859 1461 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 OFD1O75665 1012 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
BDNF-204ENST00000395980 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.74□□□□□ -0.69
BDNF-204ENST00000395980 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
BDNF-204ENST00000395980 MYO5BQ9ULV0 1848 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 KNDC1Q76NI1 1749 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 CPSF1Q10570 1443 aaKnown RBP10.74□□□□□ -0.69
BDNF-204ENST00000395980 GSPT1P15170 499 aaKnown RBP10.74□□□□□ -0.69
BDNF-204ENST00000395980 TTC22Q5TAA0 569 aa10.74□□□□□ -0.69
BDNF-204ENST00000395980 IDI1Q13907 227 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
BDNF-204ENST00000395980 INTS3Q68E01 1043 aaKnown RBP10.73□□□□□ -0.69
BDNF-204ENST00000395980 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
BDNF-204ENST00000395980 TWISTNBQ3B726 338 aaPredicted RBP10.72□□□□□ -0.69
BDNF-204ENST00000395980 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 STK26Q9P289 416 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 ALKQ9UM73 1620 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
BDNF-204ENST00000395980 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
BDNF-204ENST00000395980 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
BDNF-204ENST00000395980 NUTM2DQ5VT03 806 aaPredicted RBP10.72□□□□□ -0.69
BDNF-204ENST00000395980 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 TSPYL6Q8N831 410 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 PDLIM2Q96JY6 352 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 LMBRD1Q9NUN5 540 aa10.72□□□□□ -0.69
BDNF-204ENST00000395980 CDK19Q9BWU1 502 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 PDCL3Q9H2J4 239 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 DLG5Q8TDM6 1919 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 CASC1Q6TDU7 716 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
BDNF-204ENST00000395980 ATP10DQ9P241 1426 aa10.71□□□□□ -0.7
BDNF-204ENST00000395980 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.7
BDNF-204ENST00000395980 PHACTR3Q96KR7 559 aa10.71□□□□□ -0.7
BDNF-204ENST00000395980 ST18O60284 1047 aa10.7□□□□□ -0.7
BDNF-204ENST00000395980 ZSCAN23Q3MJ62 389 aa10.7□□□□□ -0.7
BDNF-204ENST00000395980 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
BDNF-204ENST00000395980 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
BDNF-204ENST00000395980 IL13P35225 146 aa10.7□□□□□ -0.7
BDNF-204ENST00000395980 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
BDNF-204ENST00000395980 ZNF500O60304 480 aaPredicted RBP10.7□□□□□ -0.7
BDNF-204ENST00000395980 MCM5P33992 734 aa10.7□□□□□ -0.7
BDNF-204ENST00000395980 MCTP1Q6DN14 999 aa10.69□□□□□ -0.7
BDNF-204ENST00000395980 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
BDNF-204ENST00000395980 REC8O95072 547 aa10.69□□□□□ -0.7
BDNF-204ENST00000395980 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
BDNF-204ENST00000395980 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
BDNF-204ENST00000395980 AK9Q5TCS8 1911 aa10.68□□□□□ -0.7
BDNF-204ENST00000395980 RGS12O14924 1447 aa10.68□□□□□ -0.7
BDNF-204ENST00000395980 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
BDNF-204ENST00000395980 MAP7D2Q96T17 732 aa10.68□□□□□ -0.7
BDNF-204ENST00000395980 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
BDNF-204ENST00000395980 HMOX1P09601 288 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms