RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 CCDC158Q5M9N0 1113 aa15.73■□□□□ 0.11
CAST-206ENST00000395812 STK32BQ9NY57 414 aa15.73■□□□□ 0.11
CAST-206ENST00000395812 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
CAST-206ENST00000395812 PAXIP1Q6ZW49 1069 aaPredicted RBP15.72■□□□□ 0.11
CAST-206ENST00000395812 CEP126Q9P2H0 1117 aa15.72■□□□□ 0.11
CAST-206ENST00000395812 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.11
CAST-206ENST00000395812 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.1
CAST-206ENST00000395812 ERC1Q8IUD2 1116 aa15.71■□□□□ 0.1
CAST-206ENST00000395812 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
CAST-206ENST00000395812 LARP1Q6PKG0 1096 aaKnown RBP15.7■□□□□ 0.1
CAST-206ENST00000395812 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
CAST-206ENST00000395812 RNF20Q5VTR2 975 aa15.7■□□□□ 0.1
CAST-206ENST00000395812 MCM10Q7L590 875 aa15.69■□□□□ 0.1
CAST-206ENST00000395812 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■□□□ 14.1
CAST-206ENST00000395812 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
CAST-206ENST00000395812 PPIP5K1Q6PFW1 1433 aa15.69■□□□□ 0.1
CAST-206ENST00000395812 GNAI2P04899 355 aa15.69■□□□□ 0.1
CAST-206ENST00000395812 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
CAST-206ENST00000395812 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
CAST-206ENST00000395812 RALYLQ86SE5 291 aaKnown RBP15.69■□□□□ 0.1
CAST-206ENST00000395812 TRPM2O94759 1503 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 ATP6V1AP38606 617 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 ARHGEF10O15013 1369 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 ZSCAN29Q8IWY8 852 aaPredicted RBP15.68■□□□□ 0.1
CAST-206ENST00000395812 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
CAST-206ENST00000395812 LTKP29376 864 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
CAST-206ENST00000395812 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 NSD2O96028 1365 aa15.68■□□□□ 0.1
CAST-206ENST00000395812 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
CAST-206ENST00000395812 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CAST-206ENST00000395812 CPLX1O14810 134 aa15.67■□□□□ 0.1
CAST-206ENST00000395812 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
CAST-206ENST00000395812 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
CAST-206ENST00000395812 ST5P78524 1137 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 TMEM94Q12767 1356 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 NRDCO43847 1150 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 HSP90AB2PQ58FF8 381 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 CT47B1P0C2W7 299 aaPredicted RBP15.66■□□□□ 0.1
CAST-206ENST00000395812 PLCB2Q00722 1185 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
CAST-206ENST00000395812 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 NFXL1Q6ZNB6 911 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
CAST-206ENST00000395812 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
CAST-206ENST00000395812 ST18O60284 1047 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
CAST-206ENST00000395812 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 NBPF6Q5VWK0 638 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
CAST-206ENST00000395812 NBPF4Q96M43 638 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 REC8O95072 547 aa15.65■□□□□ 0.1
CAST-206ENST00000395812 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.13e-10■□□□□ 9.2
CAST-206ENST00000395812 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 AAMPQ13685 434 aa15.64■□□□□ 0.09
CAST-206ENST00000395812 NOL8Q76FK4 1167 aaKnown RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 DDX46Q7L014 1031 aaKnown RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 FAM184AQ8NB25 1140 aa15.64■□□□□ 0.09
CAST-206ENST00000395812 DBF4Q9UBU7 674 aaPredicted RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
CAST-206ENST00000395812 GOLGA6L6A8MZA4 724 aa15.64■□□□□ 0.09
CAST-206ENST00000395812 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 RRP1P56182 461 aaKnown RBP15.64■□□□□ 0.09
CAST-206ENST00000395812 FSD1Q9BTV5 496 aa15.64■□□□□ 0.09
CAST-206ENST00000395812 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
CAST-206ENST00000395812 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
CAST-206ENST00000395812 DNAJC2Q99543 621 aaKnown RBP15.63■□□□□ 0.09
CAST-206ENST00000395812 NPHP4O75161 1426 aaPredicted RBP15.63■□□□□ 0.09
CAST-206ENST00000395812 GPTP24298 496 aa15.63■□□□□ 0.09
CAST-206ENST00000395812 RXRBP28702 533 aa15.63■□□□□ 0.09
CAST-206ENST00000395812 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
CAST-206ENST00000395812 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
CAST-206ENST00000395812 SIL1Q9H173 461 aa15.63■□□□□ 0.09
CAST-206ENST00000395812 YTHDC2Q9H6S0 1430 aaKnown RBP15.63■□□□□ 0.09
CAST-206ENST00000395812 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 TRIM29Q14134 588 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 HYPKQ9NX55 129 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 CAVIN4Q5BKX8 364 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 ZBTB3Q9H5J0 574 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 QTRT2Q9H974 415 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 PARP3Q9Y6F1 533 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 PTMAP06454 111 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 SF3A1Q15459 793 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 CCDC43Q96MW1 224 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 CHD1O14646 1710 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 TSPOAP1O95153 1857 aa15.62■□□□□ 0.09
CAST-206ENST00000395812 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
CAST-206ENST00000395812 KDM6BO15054 1643 aa15.61■□□□□ 0.09
CAST-206ENST00000395812 SART3Q15020 963 aaKnown RBP15.61■□□□□ 0.09
CAST-206ENST00000395812 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
CAST-206ENST00000395812 ANKRD36BQ8N2N9 1353 aa15.61■□□□□ 0.09
CAST-206ENST00000395812 APBA3O96018 575 aa15.61■□□□□ 0.09
CAST-206ENST00000395812 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
CAST-206ENST00000395812 ATP2B2Q01814 1243 aa15.61■□□□□ 0.09
CAST-206ENST00000395812 CHAF1AQ13111 956 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms