RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 AATKQ6ZMQ8 1374 aa11.67□□□□□ -0.54
CDRT1-203ENST00000395667 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
CDRT1-203ENST00000395667 VAMP4O75379 141 aa11.67□□□□□ -0.54
CDRT1-203ENST00000395667 GSE1Q14687 1217 aa11.67□□□□□ -0.54
CDRT1-203ENST00000395667 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
CDRT1-203ENST00000395667 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
CDRT1-203ENST00000395667 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
CDRT1-203ENST00000395667 MBIPQ9NS73 344 aa11.66□□□□□ -0.54
CDRT1-203ENST00000395667 CPS1P31327 1500 aa11.66□□□□□ -0.54
CDRT1-203ENST00000395667 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
CDRT1-203ENST00000395667 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
CDRT1-203ENST00000395667 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
CDRT1-203ENST00000395667 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
CDRT1-203ENST00000395667 TWISTNBQ3B726 338 aaPredicted RBP11.65□□□□□ -0.54
CDRT1-203ENST00000395667 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
CDRT1-203ENST00000395667 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.54
CDRT1-203ENST00000395667 FAM83GA6ND36 823 aa11.65□□□□□ -0.55
CDRT1-203ENST00000395667 LNPKQ9C0E8 428 aa11.65□□□□□ -0.55
CDRT1-203ENST00000395667 TECPR2O15040 1411 aa11.65□□□□□ -0.55
CDRT1-203ENST00000395667 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
CDRT1-203ENST00000395667 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
CDRT1-203ENST00000395667 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
CDRT1-203ENST00000395667 C22orf23Q9BZE7 217 aa11.64□□□□□ -0.55
CDRT1-203ENST00000395667 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 NUCB1Q02818 461 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 C1orf115Q9H7X2 142 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 ITSN1Q15811 1721 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
CDRT1-203ENST00000395667 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
CDRT1-203ENST00000395667 SULT6B1Q6IMI4 303 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 CHD1LQ86WJ1 897 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 C8orf58Q8NAV2 365 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 SOX12O15370 315 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 ACEP12821 1306 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 TTC21BQ7Z4L5 1316 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 ANKRD45Q5TZF3 282 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
CDRT1-203ENST00000395667 EIF4A2Q14240 407 aaKnown RBP11.61□□□□□ -0.55
CDRT1-203ENST00000395667 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
CDRT1-203ENST00000395667 PTCH1Q13635 1447 aa11.61□□□□□ -0.55
CDRT1-203ENST00000395667 PLPPR3Q6T4P5 718 aa11.61□□□□□ -0.55
CDRT1-203ENST00000395667 DLG5Q8TDM6 1919 aa11.61□□□□□ -0.55
CDRT1-203ENST00000395667 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
CDRT1-203ENST00000395667 API5Q9BZZ5 524 aaKnown RBP11.61□□□□□ -0.55
CDRT1-203ENST00000395667 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 C3P01024 1663 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 LTKP29376 864 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 ABCC4O15439 1325 aa11.6□□□□□ -0.55
CDRT1-203ENST00000395667 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
CDRT1-203ENST00000395667 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
CDRT1-203ENST00000395667 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
CDRT1-203ENST00000395667 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
CDRT1-203ENST00000395667 PLEKHG3A1L390 1219 aa11.58□□□□□ -0.56
CDRT1-203ENST00000395667 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
CDRT1-203ENST00000395667 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
CDRT1-203ENST00000395667 PLEKHG1Q9ULL1 1385 aa11.58□□□□□ -0.56
CDRT1-203ENST00000395667 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
CDRT1-203ENST00000395667 MCM10Q7L590 875 aa11.57□□□□□ -0.56
CDRT1-203ENST00000395667 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
CDRT1-203ENST00000395667 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
CDRT1-203ENST00000395667 USP6P35125 1406 aa11.57□□□□□ -0.56
CDRT1-203ENST00000395667 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.56□□□□□ -0.56
CDRT1-203ENST00000395667 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 SIRT2Q8IXJ6 389 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 OVOS2A0A0J9YW53 1432 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 OVOS2Q6IE36 1432 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 AMOTL2Q9Y2J4 779 aa11.56□□□□□ -0.56
CDRT1-203ENST00000395667 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
CDRT1-203ENST00000395667 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
CDRT1-203ENST00000395667 CHL1O00533 1208 aa11.54□□□□□ -0.56
CDRT1-203ENST00000395667 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
CDRT1-203ENST00000395667 PTPRUQ92729 1446 aa11.53□□□□□ -0.56
CDRT1-203ENST00000395667 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
CDRT1-203ENST00000395667 MAP3K19Q56UN5 1328 aa11.53□□□□□ -0.56
CDRT1-203ENST00000395667 AMPHP49418 695 aa11.53□□□□□ -0.56
CDRT1-203ENST00000395667 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
CDRT1-203ENST00000395667 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
CDRT1-203ENST00000395667 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.56
CDRT1-203ENST00000395667 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.56
CDRT1-203ENST00000395667 TTC21AQ8NDW8 1320 aa11.52□□□□□ -0.56
CDRT1-203ENST00000395667 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.56
CDRT1-203ENST00000395667 USP31Q70CQ4 1352 aa11.52□□□□□ -0.56
CDRT1-203ENST00000395667 TOPAZ1Q8N9V7 1692 aa11.52□□□□□ -0.57
CDRT1-203ENST00000395667 MIS18AQ9NYP9 233 aa11.52□□□□□ -0.57
CDRT1-203ENST00000395667 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.57
CDRT1-203ENST00000395667 FOXO3O43524 673 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 PEAK1Q9H792 1746 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 TSPYL4Q9UJ04 414 aa11.51□□□□□ -0.57
CDRT1-203ENST00000395667 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
CDRT1-203ENST00000395667 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms