RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
SNCAIP-204ENST00000395466 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
SNCAIP-204ENST00000395466 TRIM27P14373 513 aa17.79■□□□□ 0.44
SNCAIP-204ENST00000395466 PEAK1Q9H792 1746 aa17.78■□□□□ 0.44
SNCAIP-204ENST00000395466 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
SNCAIP-204ENST00000395466 NEFMP07197 916 aa17.78■□□□□ 0.44
SNCAIP-204ENST00000395466 RIMS1Q86UR5 1692 aaKnown RBP17.77■□□□□ 0.44
SNCAIP-204ENST00000395466 RGPD1P0DJD0 1748 aa17.76■□□□□ 0.43
SNCAIP-204ENST00000395466 ATF7IPQ6VMQ6 1270 aa17.76■□□□□ 0.43
SNCAIP-204ENST00000395466 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
SNCAIP-204ENST00000395466 ZNF853P0CG23 659 aa17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
SNCAIP-204ENST00000395466 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 KIF16BQ96L93 1317 aa17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 EIF4A2Q14240 407 aaKnown RBP17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 FMN2Q9NZ56 1722 aa17.73■□□□□ 0.43
SNCAIP-204ENST00000395466 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
SNCAIP-204ENST00000395466 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-204ENST00000395466 CEP170BQ9Y4F5 1589 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-204ENST00000395466 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
SNCAIP-204ENST00000395466 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
SNCAIP-204ENST00000395466 VAMP4O75379 141 aa17.71■□□□□ 0.43
SNCAIP-204ENST00000395466 GNAI1P63096 354 aa17.71■□□□□ 0.43
SNCAIP-204ENST00000395466 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
SNCAIP-204ENST00000395466 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
SNCAIP-204ENST00000395466 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
SNCAIP-204ENST00000395466 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
SNCAIP-204ENST00000395466 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 PIK3C2AO00443 1686 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
SNCAIP-204ENST00000395466 MARF1Q9Y4F3 1742 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-204ENST00000395466 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-204ENST00000395466 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
SNCAIP-204ENST00000395466 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
SNCAIP-204ENST00000395466 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 ANKARQ7Z5J8 1434 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 USP19O94966 1318 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
SNCAIP-204ENST00000395466 USP54Q70EL1 1684 aa17.66■□□□□ 0.42
SNCAIP-204ENST00000395466 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-204ENST00000395466 KCNA6P17658 529 aa17.65■□□□□ 0.42
SNCAIP-204ENST00000395466 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
SNCAIP-204ENST00000395466 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
SNCAIP-204ENST00000395466 ZNF142P52746 1687 aaPredicted RBP17.64■□□□□ 0.41
SNCAIP-204ENST00000395466 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
SNCAIP-204ENST00000395466 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 ARHGEF10O15013 1369 aa17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 SEC24BO95487 1268 aa17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 NBR1Q14596 966 aa17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-204ENST00000395466 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
SNCAIP-204ENST00000395466 FLT4P35916 1363 aa17.61■□□□□ 0.41
SNCAIP-204ENST00000395466 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
SNCAIP-204ENST00000395466 ABCC4O15439 1325 aa17.6■□□□□ 0.41
SNCAIP-204ENST00000395466 KDRP35968 1356 aa17.6■□□□□ 0.41
SNCAIP-204ENST00000395466 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-204ENST00000395466 SOX12O15370 315 aa17.59■□□□□ 0.41
SNCAIP-204ENST00000395466 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
SNCAIP-204ENST00000395466 CHL1O00533 1208 aa17.58■□□□□ 0.41
SNCAIP-204ENST00000395466 CRB1P82279 1406 aa17.58■□□□□ 0.4
SNCAIP-204ENST00000395466 SETD1BQ9UPS6 1966 aaKnown RBP17.58■□□□□ 0.4
SNCAIP-204ENST00000395466 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
SNCAIP-204ENST00000395466 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
SNCAIP-204ENST00000395466 MCM10Q7L590 875 aa17.56■□□□□ 0.4
SNCAIP-204ENST00000395466 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
SNCAIP-204ENST00000395466 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
SNCAIP-204ENST00000395466 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
SNCAIP-204ENST00000395466 NLRP6P59044 892 aa17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 NUCB1Q02818 461 aa17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 ANKLE2Q86XL3 938 aa17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 EYA1Q99502 592 aa17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-204ENST00000395466 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
SNCAIP-204ENST00000395466 AMPHP49418 695 aa17.53■□□□□ 0.4
SNCAIP-204ENST00000395466 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-204ENST00000395466 RGS12O14924 1447 aa17.53■□□□□ 0.4
SNCAIP-204ENST00000395466 FOXO3O43524 673 aa17.52■□□□□ 0.4
SNCAIP-204ENST00000395466 LTN1O94822 1766 aa17.51■□□□□ 0.39
SNCAIP-204ENST00000395466 HOXC9P31274 260 aa17.5■□□□□ 0.39
SNCAIP-204ENST00000395466 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms