RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 COL18A1P39060 1754 aa13.35□□□□□ -0.27
HIF1A-203ENST00000394997 KDRP35968 1356 aa13.35□□□□□ -0.27
HIF1A-203ENST00000394997 NME9Q86XW9 330 aa13.34□□□□□ -0.27
HIF1A-203ENST00000394997 GLI3P10071 1580 aa13.34□□□□□ -0.27
HIF1A-203ENST00000394997 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
HIF1A-203ENST00000394997 IL27Q8NEV9 243 aa13.33□□□□□ -0.28
HIF1A-203ENST00000394997 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
HIF1A-203ENST00000394997 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
HIF1A-203ENST00000394997 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
HIF1A-203ENST00000394997 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.28
HIF1A-203ENST00000394997 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
HIF1A-203ENST00000394997 MST1RQ04912 1400 aa13.32□□□□□ -0.28
HIF1A-203ENST00000394997 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
HIF1A-203ENST00000394997 SLIT3O75094 1523 aa13.32□□□□□ -0.28
HIF1A-203ENST00000394997 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
HIF1A-203ENST00000394997 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
HIF1A-203ENST00000394997 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
HIF1A-203ENST00000394997 FCHSD2O94868 740 aa13.31□□□□□ -0.28
HIF1A-203ENST00000394997 SEC24BO95487 1268 aa13.3□□□□□ -0.28
HIF1A-203ENST00000394997 TRIM27P14373 513 aa13.3□□□□□ -0.28
HIF1A-203ENST00000394997 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
HIF1A-203ENST00000394997 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
HIF1A-203ENST00000394997 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
HIF1A-203ENST00000394997 COG6Q9Y2V7 657 aa13.28□□□□□ -0.28
HIF1A-203ENST00000394997 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
HIF1A-203ENST00000394997 ATP10DQ9P241 1426 aa13.27□□□□□ -0.28
HIF1A-203ENST00000394997 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.28
HIF1A-203ENST00000394997 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.28
HIF1A-203ENST00000394997 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.28
HIF1A-203ENST00000394997 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
HIF1A-203ENST00000394997 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■■■■□ 23.3
HIF1A-203ENST00000394997 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
HIF1A-203ENST00000394997 MVPQ14764 893 aaKnown RBP13.27□□□□□ -0.29
HIF1A-203ENST00000394997 MLECQ14165 292 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 POGKQ9P215 609 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 ABCC4O15439 1325 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 SHANK3Q9BYB0 1731 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
HIF1A-203ENST00000394997 VAMP4O75379 141 aa13.25□□□□□ -0.29
HIF1A-203ENST00000394997 ACEP12821 1306 aa13.25□□□□□ -0.29
HIF1A-203ENST00000394997 AAMPQ13685 434 aa13.25□□□□□ -0.29
HIF1A-203ENST00000394997 TSPYL6Q8N831 410 aa13.25□□□□□ -0.29
HIF1A-203ENST00000394997 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
HIF1A-203ENST00000394997 C5P01031 1676 aa13.24□□□□□ -0.29
HIF1A-203ENST00000394997 CFAP53Q96M91 514 aa13.24□□□□□ -0.29
HIF1A-203ENST00000394997 ARHGEF10O15013 1369 aa13.24□□□□□ -0.29
HIF1A-203ENST00000394997 HDAC1Q13547 482 aaPredicted RBP13.24□□□□□ -0.29
HIF1A-203ENST00000394997 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
HIF1A-203ENST00000394997 ABCA3Q99758 1704 aa13.24□□□□□ -0.29
HIF1A-203ENST00000394997 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
HIF1A-203ENST00000394997 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
HIF1A-203ENST00000394997 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
HIF1A-203ENST00000394997 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
HIF1A-203ENST00000394997 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
HIF1A-203ENST00000394997 SETD1BQ9UPS6 1966 aaKnown RBP13.23□□□□□ -0.29
HIF1A-203ENST00000394997 SCN11AQ9UI33 1791 aa13.23□□□□□ -0.29
HIF1A-203ENST00000394997 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
HIF1A-203ENST00000394997 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
HIF1A-203ENST00000394997 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 RIPK4P57078 832 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
HIF1A-203ENST00000394997 MSH6P52701 1360 aa13.22□□□□□ -0.29
HIF1A-203ENST00000394997 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
HIF1A-203ENST00000394997 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
HIF1A-203ENST00000394997 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
HIF1A-203ENST00000394997 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.3
HIF1A-203ENST00000394997 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
HIF1A-203ENST00000394997 ZBTB7BO15156 539 aaPredicted RBP13.2□□□□□ -0.3
HIF1A-203ENST00000394997 ATF7IPQ6VMQ6 1270 aa13.2□□□□□ -0.3
HIF1A-203ENST00000394997 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
HIF1A-203ENST00000394997 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
HIF1A-203ENST00000394997 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
HIF1A-203ENST00000394997 ABCC6O95255 1503 aa13.2□□□□□ -0.3
HIF1A-203ENST00000394997 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
HIF1A-203ENST00000394997 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
HIF1A-203ENST00000394997 STRCQ7RTU9 1775 aa13.19□□□□□ -0.3
HIF1A-203ENST00000394997 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
HIF1A-203ENST00000394997 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
HIF1A-203ENST00000394997 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
HIF1A-203ENST00000394997 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 KIF24Q5T7B8 1368 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
HIF1A-203ENST00000394997 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
HIF1A-203ENST00000394997 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
HIF1A-203ENST00000394997 ADGRL3Q9HAR2 1447 aa13.17□□□□□ -0.3
HIF1A-203ENST00000394997 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
HIF1A-203ENST00000394997 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
HIF1A-203ENST00000394997 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
HIF1A-203ENST00000394997 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
HIF1A-203ENST00000394997 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
HIF1A-203ENST00000394997 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
HIF1A-203ENST00000394997 HMOX1P09601 288 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms