RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CLTCQ00610 1675 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-209ENST00000394804 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-209ENST00000394804 SMC5Q8IY18 1101 aa14.32□□□□□ -0.12
UBE2D3-209ENST00000394804 NUCB1Q02818 461 aa14.31□□□□□ -0.12
UBE2D3-209ENST00000394804 CHMP4AQ9BY43 222 aa14.31□□□□□ -0.12
UBE2D3-209ENST00000394804 ABCC3O15438 1527 aa14.31□□□□□ -0.12
UBE2D3-209ENST00000394804 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
UBE2D3-209ENST00000394804 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 PTPRMP28827 1452 aa14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 NPATQ14207 1427 aa14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 CEP152O94986 1710 aa14.3□□□□□ -0.12
UBE2D3-209ENST00000394804 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 MROH1Q8NDA8 1641 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 ZBTB40Q9NUA8 1239 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 TXNDC2Q86VQ3 553 aa14.29□□□□□ -0.12
UBE2D3-209ENST00000394804 TET3O43151 1660 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 HSPA2P54652 639 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 EMILIN1Q9Y6C2 1016 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 UGGT1Q9NYU2 1555 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 CLTCL1P53675 1640 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 PHF14O94880 888 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 ARHGAP45Q92619 1136 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
UBE2D3-209ENST00000394804 RNF17Q9BXT8 1623 aaKnown RBP14.27□□□□□ -0.13
UBE2D3-209ENST00000394804 TBC1D9Q6ZT07 1266 aa14.27□□□□□ -0.13
UBE2D3-209ENST00000394804 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 NME9Q86XW9 330 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 ESPNB1AK53 854 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 CCDC173Q0VFZ6 552 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 SNX21Q969T3 373 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 LTV1Q96GA3 475 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 TNRQ92752 1358 aa14.26□□□□□ -0.13
UBE2D3-209ENST00000394804 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 KIF1BO60333 1816 aa14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
UBE2D3-209ENST00000394804 ERC2O15083 957 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 XRCC6P12956 609 aaKnown RBP eCLIP14.24□□□□□ -0.134e-17■□□□□ 10.6
UBE2D3-209ENST00000394804 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 DEPDC5O75140 1603 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 GNAI3P08754 354 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 NEK4P51957 841 aa14.24□□□□□ -0.13
UBE2D3-209ENST00000394804 LMOD2Q6P5Q4 547 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 ZFYVE9O95405 1425 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 FBLN1P23142 703 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 MCM2P49736 904 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 FOXD4L6Q3SYB3 417 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 FOXD4L3Q6VB84 417 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-209ENST00000394804 GNAI2P04899 355 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 POLKQ9UBT6 870 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 WASLO00401 505 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 PRPF40AO75400 957 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 SSFA2P28290 1259 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
UBE2D3-209ENST00000394804 VAMP4O75379 141 aa14.21□□□□□ -0.13
UBE2D3-209ENST00000394804 MBD3O95983 291 aa14.21□□□□□ -0.13
UBE2D3-209ENST00000394804 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
UBE2D3-209ENST00000394804 FGD1P98174 961 aa14.21□□□□□ -0.14
UBE2D3-209ENST00000394804 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 USP19O94966 1318 aa14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 ATP6V1DQ9Y5K8 247 aa14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 VWDEQ8N2E2 1590 aa14.2□□□□□ -0.14
UBE2D3-209ENST00000394804 CHAF1AQ13111 956 aaPredicted RBP14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 C3P01024 1663 aa14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 UBTFL1P0CB47 393 aaPredicted RBP14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 YTHDC2Q9H6S0 1430 aaKnown RBP14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 MCM10Q7L590 875 aa14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
UBE2D3-209ENST00000394804 FAM83GA6ND36 823 aa14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 ZBTB7BO15156 539 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
UBE2D3-209ENST00000394804 PHACTR3Q96KR7 559 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms