RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-208ENST00000394803 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
UBE2D3-208ENST00000394803 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
UBE2D3-208ENST00000394803 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.4
UBE2D3-208ENST00000394803 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 PRKAR2BP31323 418 aa12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 DDIT3P35638 169 aa12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 NUTM2DQ5VT03 806 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 LNPKQ9C0E8 428 aa12.52□□□□□ -0.41
UBE2D3-208ENST00000394803 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-208ENST00000394803 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.414e-17■□□□□ 10.6
UBE2D3-208ENST00000394803 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-208ENST00000394803 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 ABCC4O15439 1325 aa12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 CDC45O75419 566 aa12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 ANKRD45Q5TZF3 282 aa12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 MRPL50Q8N5N7 158 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-208ENST00000394803 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 K7ELQ4 463 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 VAMP4O75379 141 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 CLCN1P35523 988 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 CABP1Q9NZU7 370 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
UBE2D3-208ENST00000394803 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-208ENST00000394803 RAPGEF3O95398 923 aa12.47□□□□□ -0.41
UBE2D3-208ENST00000394803 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
UBE2D3-208ENST00000394803 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
UBE2D3-208ENST00000394803 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
UBE2D3-208ENST00000394803 GZF1Q9H116 711 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-208ENST00000394803 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 RABEP1Q15276 862 aa12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-208ENST00000394803 CLEC17AQ6ZS10 378 aa12.46□□□□□ -0.42
UBE2D3-208ENST00000394803 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
UBE2D3-208ENST00000394803 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
UBE2D3-208ENST00000394803 RIMS2Q9UQ26 1411 aa12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 AGLP35573 1532 aa12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 IL13P35225 146 aa12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 NUCB2P80303 420 aa12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
UBE2D3-208ENST00000394803 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 RPAP2Q8IXW5 612 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 COG3Q96JB2 828 aa12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
UBE2D3-208ENST00000394803 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 DLG5Q8TDM6 1919 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 KIF2CQ99661 725 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
UBE2D3-208ENST00000394803 A2ML1A8K2U0 1454 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 PTPRCP08575 1304 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 HDGFP51858 240 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 HMOX1P09601 288 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 KLHL40Q2TBA0 621 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
UBE2D3-208ENST00000394803 ST18O60284 1047 aa12.4□□□□□ -0.42
UBE2D3-208ENST00000394803 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
UBE2D3-208ENST00000394803 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
UBE2D3-208ENST00000394803 ARXQ96QS3 562 aa12.4□□□□□ -0.42
UBE2D3-208ENST00000394803 ESPNB1AK53 854 aa12.39□□□□□ -0.43
UBE2D3-208ENST00000394803 HMMRO75330 724 aa12.39□□□□□ -0.43
UBE2D3-208ENST00000394803 REC8O95072 547 aa12.39□□□□□ -0.43
UBE2D3-208ENST00000394803 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
UBE2D3-208ENST00000394803 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
UBE2D3-208ENST00000394803 C3P01024 1663 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 GLIPR1L2Q4G1C9 344 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 UBE2Q2Q8WVN8 375 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 TECPR2O15040 1411 aa12.38□□□□□ -0.43
UBE2D3-208ENST00000394803 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
UBE2D3-208ENST00000394803 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-208ENST00000394803 CPS1P31327 1500 aa12.37□□□□□ -0.43
UBE2D3-208ENST00000394803 C8orf58Q8NAV2 365 aa12.36□□□□□ -0.43
UBE2D3-208ENST00000394803 BAG4O95429 457 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms