RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.34■■□□□ 1.81
PRKCD-202ENST00000394729 RARSP54136 660 aaKnown RBP26.34■■□□□ 1.81
PRKCD-202ENST00000394729 AKAP12Q02952 1782 aa26.34■■□□□ 1.81
PRKCD-202ENST00000394729 MCM10Q7L590 875 aa26.33■■□□□ 1.8
PRKCD-202ENST00000394729 RBM19Q9Y4C8 960 aaKnown RBP26.32■■□□□ 1.8
PRKCD-202ENST00000394729 OVOS2A0A0J9YW53 1432 aa26.32■■□□□ 1.8
PRKCD-202ENST00000394729 OVOS2Q6IE36 1432 aa26.32■■□□□ 1.8
PRKCD-202ENST00000394729 PIK3R4Q99570 1358 aa26.32■■□□□ 1.8
PRKCD-202ENST00000394729 KDM4FA0A1W2PPD8 638 aa26.31■■□□□ 1.8
PRKCD-202ENST00000394729 NFE2L2Q16236 605 aa26.31■■□□□ 1.8
PRKCD-202ENST00000394729 AATKQ6ZMQ8 1374 aa26.31■■□□□ 1.8
PRKCD-202ENST00000394729 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
PRKCD-202ENST00000394729 CCDC27Q2M243 656 aa26.3■■□□□ 1.8
PRKCD-202ENST00000394729 PNNQ9H307 717 aaKnown RBP26.3■■□□□ 1.8
PRKCD-202ENST00000394729 SMC4Q9NTJ3 1288 aa26.3■■□□□ 1.8
PRKCD-202ENST00000394729 RLBP1P12271 317 aa26.29■■□□□ 1.8
PRKCD-202ENST00000394729 MIS18AQ9NYP9 233 aa26.29■■□□□ 1.8
PRKCD-202ENST00000394729 NALCNQ8IZF0 1738 aa26.29■■□□□ 1.8
PRKCD-202ENST00000394729 TTC21AQ8NDW8 1320 aa26.29■■□□□ 1.8
PRKCD-202ENST00000394729 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
PRKCD-202ENST00000394729 CDK12Q9NYV4 1490 aaPredicted RBP26.28■■□□□ 1.8
PRKCD-202ENST00000394729 CHD2O14647 1828 aaKnown RBP26.27■■□□□ 1.8
PRKCD-202ENST00000394729 SSH2Q76I76 1423 aa26.27■■□□□ 1.8
PRKCD-202ENST00000394729 ZNF142P52746 1687 aaPredicted RBP26.26■■□□□ 1.8
PRKCD-202ENST00000394729 KRT24Q2M2I5 525 aa26.26■■□□□ 1.79
PRKCD-202ENST00000394729 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
PRKCD-202ENST00000394729 EYA1Q99502 592 aa26.26■■□□□ 1.79
PRKCD-202ENST00000394729 SSH1Q8WYL5 1049 aa26.25■■□□□ 1.79
PRKCD-202ENST00000394729 ATF3P18847 181 aa26.24■■□□□ 1.79
PRKCD-202ENST00000394729 ADGRL3Q9HAR2 1447 aa26.24■■□□□ 1.79
PRKCD-202ENST00000394729 TMEM94Q12767 1356 aa26.24■■□□□ 1.79
PRKCD-202ENST00000394729 NRKQ7Z2Y5 1582 aa26.22■■□□□ 1.79
PRKCD-202ENST00000394729 HOXC9P31274 260 aa26.22■■□□□ 1.79
PRKCD-202ENST00000394729 ZC3H6P61129 1189 aaKnown RBP26.22■■□□□ 1.79
PRKCD-202ENST00000394729 CABLES1Q8TDN4 633 aa26.22■■□□□ 1.79
PRKCD-202ENST00000394729 LRRC59Q96AG4 307 aaKnown RBP26.2■■□□□ 1.79
PRKCD-202ENST00000394729 MBIPQ9NS73 344 aa26.2■■□□□ 1.79
PRKCD-202ENST00000394729 FTSJ3Q8IY81 847 aaKnown RBP26.2■■□□□ 1.78
PRKCD-202ENST00000394729 C19orf44Q9H6X5 657 aa26.2■■□□□ 1.78
PRKCD-202ENST00000394729 PEAK1Q9H792 1746 aa26.2■■□□□ 1.78
PRKCD-202ENST00000394729 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
PRKCD-202ENST00000394729 ANKARQ7Z5J8 1434 aa26.19■■□□□ 1.78
PRKCD-202ENST00000394729 KRT28Q7Z3Y7 464 aa26.19■■□□□ 1.78
PRKCD-202ENST00000394729 FLT4P35916 1363 aa26.19■■□□□ 1.78
PRKCD-202ENST00000394729 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
PRKCD-202ENST00000394729 MTHFSDQ2M296 383 aaKnown RBP26.18■■□□□ 1.78
PRKCD-202ENST00000394729 BCL11AQ9H165 835 aa26.18■■□□□ 1.78
PRKCD-202ENST00000394729 NOB1Q9ULX3 412 aaKnown RBP26.18■■□□□ 1.78
PRKCD-202ENST00000394729 FMN2Q9NZ56 1722 aa26.17■■□□□ 1.78
PRKCD-202ENST00000394729 RGS3P49796 1198 aa26.17■■□□□ 1.78
PRKCD-202ENST00000394729 ZNF335Q9H4Z2 1342 aaPredicted RBP26.15■■□□□ 1.78
PRKCD-202ENST00000394729 C8orf58Q8NAV2 365 aa26.15■■□□□ 1.78
PRKCD-202ENST00000394729 SBNO1A3KN83 1393 aa26.15■■□□□ 1.78
PRKCD-202ENST00000394729 ITPRIPQ8IWB1 547 aa26.13■■□□□ 1.77
PRKCD-202ENST00000394729 GCP02774 474 aa26.13■■□□□ 1.77
PRKCD-202ENST00000394729 IGHDP01880 384 aa26.12■■□□□ 1.77
PRKCD-202ENST00000394729 TRIM27P14373 513 aa26.12■■□□□ 1.77
PRKCD-202ENST00000394729 NECTIN2Q92692 538 aa26.11■■□□□ 1.77
PRKCD-202ENST00000394729 ZKSCAN2Q63HK3 967 aa26.1■■□□□ 1.77
PRKCD-202ENST00000394729 RTF1Q92541 710 aaKnown RBP26.1■■□□□ 1.77
PRKCD-202ENST00000394729 NBPF6Q5VWK0 638 aa26.1■■□□□ 1.77
PRKCD-202ENST00000394729 NBPF4Q96M43 638 aa26.1■■□□□ 1.77
PRKCD-202ENST00000394729 GNAI1P63096 354 aa26.09■■□□□ 1.77
PRKCD-202ENST00000394729 TWISTNBQ3B726 338 aaPredicted RBP26.09■■□□□ 1.77
PRKCD-202ENST00000394729 DZIP1LQ8IYY4 767 aaKnown RBP26.08■■□□□ 1.77
PRKCD-202ENST00000394729 CHRNA2Q15822 529 aa26.07■■□□□ 1.76
PRKCD-202ENST00000394729 AXIN2Q9Y2T1 843 aa26.07■■□□□ 1.76
PRKCD-202ENST00000394729 NPM2Q86SE8 214 aaKnown RBP26.07■■□□□ 1.76
PRKCD-202ENST00000394729 PDE3AQ14432 1141 aa26.06■■□□□ 1.76
PRKCD-202ENST00000394729 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
PRKCD-202ENST00000394729 CFAP44Q96MT7 982 aa26.06■■□□□ 1.76
PRKCD-202ENST00000394729 C1orf167Q5SNV9 1468 aa26.06■■□□□ 1.76
PRKCD-202ENST00000394729 VAMP4O75379 141 aa26.05■■□□□ 1.76
PRKCD-202ENST00000394729 PCDHB15Q9Y5E8 787 aa26.05■■□□□ 1.76
PRKCD-202ENST00000394729 IL16Q14005 1332 aa26.05■■□□□ 1.76
PRKCD-202ENST00000394729 IFT57Q9NWB7 429 aa26.05■■□□□ 1.76
PRKCD-202ENST00000394729 TMEM57Q8N5G2 664 aa26.04■■□□□ 1.76
PRKCD-202ENST00000394729 DLG5Q8TDM6 1919 aa26.03■■□□□ 1.76
PRKCD-202ENST00000394729 IGSF1Q8N6C5 1336 aa26.03■■□□□ 1.76
PRKCD-202ENST00000394729 ATF7IPQ6VMQ6 1270 aa26.03■■□□□ 1.76
PRKCD-202ENST00000394729 CALD1Q05682 793 aaKnown RBP26.02■■□□□ 1.76
PRKCD-202ENST00000394729 TSPYL4Q9UJ04 414 aa26.01■■□□□ 1.76
PRKCD-202ENST00000394729 IP6K1Q92551 441 aa26.01■■□□□ 1.75
PRKCD-202ENST00000394729 C1orf115Q9H7X2 142 aa26.01■■□□□ 1.75
PRKCD-202ENST00000394729 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
PRKCD-202ENST00000394729 ZNF853P0CG23 659 aa25.99■■□□□ 1.75
PRKCD-202ENST00000394729 CADPS2Q86UW7 1296 aa25.99■■□□□ 1.75
PRKCD-202ENST00000394729 KCNH5Q8NCM2 988 aa25.99■■□□□ 1.75
PRKCD-202ENST00000394729 MVPQ14764 893 aaKnown RBP25.99■■□□□ 1.75
PRKCD-202ENST00000394729 KDM2BQ8NHM5 1336 aa25.98■■□□□ 1.75
PRKCD-202ENST00000394729 ANKRD24Q8TF21 1146 aa25.98■■□□□ 1.75
PRKCD-202ENST00000394729 CENPQQ7L2Z9 268 aaPredicted RBP25.97■■□□□ 1.75
PRKCD-202ENST00000394729 ARHGEF10O15013 1369 aa25.97■■□□□ 1.75
PRKCD-202ENST00000394729 MSH6P52701 1360 aa25.97■■□□□ 1.75
PRKCD-202ENST00000394729 CSB-PGBD3P0DP91 1061 aa25.96■■□□□ 1.75
PRKCD-202ENST00000394729 NCBP3Q53F19 620 aaKnown RBP25.96■■□□□ 1.75
PRKCD-202ENST00000394729 NLRP2Q9NX02 1062 aa25.96■■□□□ 1.75
PRKCD-202ENST00000394729 LMTK3Q96Q04 1460 aa25.95■■□□□ 1.74
PRKCD-202ENST00000394729 ARHGEF25Q86VW2 580 aa25.95■■□□□ 1.74
PRKCD-202ENST00000394729 MPRIPQ6WCQ1 1025 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms