RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
CNP-201ENST00000393888 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
CNP-201ENST00000393888 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
CNP-201ENST00000393888 CDC45O75419 566 aa20.32■□□□□ 0.84
CNP-201ENST00000393888 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
CNP-201ENST00000393888 STK26Q9P289 416 aa20.32■□□□□ 0.84
CNP-201ENST00000393888 A0A1W2PP64 1363 aa20.31■□□□□ 0.84
CNP-201ENST00000393888 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
CNP-201ENST00000393888 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
CNP-201ENST00000393888 LMBRD1Q9NUN5 540 aa20.31■□□□□ 0.84
CNP-201ENST00000393888 ATAD2Q6PL18 1390 aa20.31■□□□□ 0.84
CNP-201ENST00000393888 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
CNP-201ENST00000393888 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
CNP-201ENST00000393888 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
CNP-201ENST00000393888 CLEC17AQ6ZS10 378 aa20.3■□□□□ 0.84
CNP-201ENST00000393888 NSD2O96028 1365 aa20.3■□□□□ 0.84
CNP-201ENST00000393888 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
CNP-201ENST00000393888 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.3■□□□□ 0.84
CNP-201ENST00000393888 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
CNP-201ENST00000393888 EFCAB6Q5THR3 1501 aa20.29■□□□□ 0.84
CNP-201ENST00000393888 ZNF445P59923 1031 aa20.29■□□□□ 0.84
CNP-201ENST00000393888 FOXD4L5Q5VV16 416 aaPredicted RBP20.29■□□□□ 0.84
CNP-201ENST00000393888 FOXD4L4Q8WXT5 416 aaPredicted RBP20.29■□□□□ 0.84
CNP-201ENST00000393888 FYB1O15117 783 aa20.29■□□□□ 0.84
CNP-201ENST00000393888 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
CNP-201ENST00000393888 MRPL50Q8N5N7 158 aaKnown RBP20.29■□□□□ 0.84
CNP-201ENST00000393888 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
CNP-201ENST00000393888 GGT6Q6P531 493 aa20.28■□□□□ 0.84
CNP-201ENST00000393888 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
CNP-201ENST00000393888 ADGRB3O60242 1522 aa20.27■□□□□ 0.84
CNP-201ENST00000393888 ZBTB7CA1YPR0 619 aa20.27■□□□□ 0.84
CNP-201ENST00000393888 VAMP4O75379 141 aa20.27■□□□□ 0.84
CNP-201ENST00000393888 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
CNP-201ENST00000393888 GPT2Q8TD30 523 aa20.27■□□□□ 0.84
CNP-201ENST00000393888 HMOX1P09601 288 aa20.26■□□□□ 0.83
CNP-201ENST00000393888 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
CNP-201ENST00000393888 APBB1O00213 710 aa20.26■□□□□ 0.83
CNP-201ENST00000393888 MED14O60244 1454 aa20.25■□□□□ 0.83
CNP-201ENST00000393888 NUCB2P80303 420 aa20.25■□□□□ 0.83
CNP-201ENST00000393888 RABEP1Q15276 862 aa20.25■□□□□ 0.83
CNP-201ENST00000393888 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
CNP-201ENST00000393888 NOL7Q9UMY1 257 aaKnown RBP20.25■□□□□ 0.83
CNP-201ENST00000393888 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
CNP-201ENST00000393888 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
CNP-201ENST00000393888 PPLO60437 1756 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 FRMPD1Q5SYB0 1578 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 UQCRHLA0A096LP55 91 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 UQCRHP07919 91 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
CNP-201ENST00000393888 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
CNP-201ENST00000393888 SYCE3A1L190 88 aa20.23■□□□□ 0.83
CNP-201ENST00000393888 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
CNP-201ENST00000393888 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
CNP-201ENST00000393888 ZDHHC9Q9Y397 364 aa20.22■□□□□ 0.83
CNP-201ENST00000393888 PDLIM2Q96JY6 352 aa20.22■□□□□ 0.83
CNP-201ENST00000393888 TMEM63CQ9P1W3 806 aa20.21■□□□□ 0.83
CNP-201ENST00000393888 SMARCA5O60264 1052 aaPredicted RBP20.2■□□□□ 0.82
CNP-201ENST00000393888 ZNF500O60304 480 aaPredicted RBP20.2■□□□□ 0.82
CNP-201ENST00000393888 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
CNP-201ENST00000393888 NPATQ14207 1427 aa20.19■□□□□ 0.82
CNP-201ENST00000393888 MBIPQ9NS73 344 aa20.19■□□□□ 0.82
CNP-201ENST00000393888 HECW2Q9P2P5 1572 aa20.19■□□□□ 0.82
CNP-201ENST00000393888 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
CNP-201ENST00000393888 ZKSCAN5Q9Y2L8 839 aa20.19■□□□□ 0.82
CNP-201ENST00000393888 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 ABCC4O15439 1325 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 FCHSD2O94868 740 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 BRPF1P55201 1214 aaPredicted RBP20.18■□□□□ 0.82
CNP-201ENST00000393888 HS1BP3Q53T59 392 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
CNP-201ENST00000393888 C8orf58Q8NAV2 365 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 CHMP4BQ9H444 224 aaKnown RBP20.18■□□□□ 0.82
CNP-201ENST00000393888 ARHGAP45Q92619 1136 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 LRRC7Q96NW7 1537 aa20.18■□□□□ 0.82
CNP-201ENST00000393888 TWISTNBQ3B726 338 aaPredicted RBP20.17■□□□□ 0.82
CNP-201ENST00000393888 MPNDQ8N594 471 aa20.17■□□□□ 0.82
CNP-201ENST00000393888 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
CNP-201ENST00000393888 SDSP20132 328 aa20.17■□□□□ 0.82
CNP-201ENST00000393888 TERF1P54274 439 aa20.17■□□□□ 0.82
CNP-201ENST00000393888 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
CNP-201ENST00000393888 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
CNP-201ENST00000393888 TERF2IPQ9NYB0 399 aa20.16■□□□□ 0.82
CNP-201ENST00000393888 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
CNP-201ENST00000393888 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
CNP-201ENST00000393888 LRSAM1Q6UWE0 723 aa20.16■□□□□ 0.82
CNP-201ENST00000393888 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
CNP-201ENST00000393888 DCTPP1Q9H773 170 aa20.15■□□□□ 0.82
CNP-201ENST00000393888 ST18O60284 1047 aa20.15■□□□□ 0.82
CNP-201ENST00000393888 NFE2L2Q16236 605 aa20.15■□□□□ 0.82
CNP-201ENST00000393888 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
CNP-201ENST00000393888 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
CNP-201ENST00000393888 FAM83GA6ND36 823 aa20.14■□□□□ 0.82
CNP-201ENST00000393888 ZNF428Q96B54 188 aa20.14■□□□□ 0.82
CNP-201ENST00000393888 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.81
CNP-201ENST00000393888 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.81
CNP-201ENST00000393888 PRDM4Q9UKN5 801 aa20.14■□□□□ 0.81
CNP-201ENST00000393888 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms