RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 AGLP35573 1532 aa23.67■■□□□ 1.38
CBX1-202ENST00000393408 TSPYL6Q8N831 410 aa23.67■■□□□ 1.38
CBX1-202ENST00000393408 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
CBX1-202ENST00000393408 HSCBQ8IWL3 235 aa23.67■■□□□ 1.38
CBX1-202ENST00000393408 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
CBX1-202ENST00000393408 BMP2KLQ5H9B9 411 aa23.66■■□□□ 1.38
CBX1-202ENST00000393408 L1TD1Q5T7N2 865 aaKnown RBP23.65■■□□□ 1.38
CBX1-202ENST00000393408 GCC1Q96CN9 775 aa23.65■■□□□ 1.38
CBX1-202ENST00000393408 ANO8Q9HCE9 1232 aaPredicted RBP23.65■■□□□ 1.38
CBX1-202ENST00000393408 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
CBX1-202ENST00000393408 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
CBX1-202ENST00000393408 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
CBX1-202ENST00000393408 NRXN3Q9Y4C0 1643 aa23.65■■□□□ 1.38
CBX1-202ENST00000393408 ABCC4O15439 1325 aa23.64■■□□□ 1.38
CBX1-202ENST00000393408 NME9Q86XW9 330 aa23.64■■□□□ 1.37
CBX1-202ENST00000393408 ZNF692Q9BU19 519 aaPredicted RBP23.64■■□□□ 1.37
CBX1-202ENST00000393408 WASLO00401 505 aaPredicted RBP23.63■■□□□ 1.37
CBX1-202ENST00000393408 MON2Q7Z3U7 1717 aa23.63■■□□□ 1.37
CBX1-202ENST00000393408 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
CBX1-202ENST00000393408 SNX21Q969T3 373 aa23.63■■□□□ 1.37
CBX1-202ENST00000393408 ANKRD45Q5TZF3 282 aa23.62■■□□□ 1.37
CBX1-202ENST00000393408 FAM43AQ8N2R8 423 aa23.62■■□□□ 1.37
CBX1-202ENST00000393408 C1orf115Q9H7X2 142 aa23.62■■□□□ 1.37
CBX1-202ENST00000393408 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
CBX1-202ENST00000393408 DDIT3P35638 169 aa23.61■■□□□ 1.37
CBX1-202ENST00000393408 CPS1P31327 1500 aa23.6■■□□□ 1.37
CBX1-202ENST00000393408 TWISTNBQ3B726 338 aaPredicted RBP23.6■■□□□ 1.37
CBX1-202ENST00000393408 SIRT2Q8IXJ6 389 aa23.6■■□□□ 1.37
CBX1-202ENST00000393408 CFAP44Q96MT7 982 aa23.6■■□□□ 1.37
CBX1-202ENST00000393408 ELL2O00472 640 aaPredicted RBP23.59■■□□□ 1.37
CBX1-202ENST00000393408 LMOD3Q0VAK6 560 aa23.59■■□□□ 1.37
CBX1-202ENST00000393408 AKAP12Q02952 1782 aa23.58■■□□□ 1.37
CBX1-202ENST00000393408 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.36
CBX1-202ENST00000393408 C8orf58Q8NAV2 365 aa23.58■■□□□ 1.36
CBX1-202ENST00000393408 C3P01024 1663 aa23.57■■□□□ 1.36
CBX1-202ENST00000393408 METP08581 1390 aa23.57■■□□□ 1.36
CBX1-202ENST00000393408 FSD2A1L4K1 749 aa23.57■■□□□ 1.36
CBX1-202ENST00000393408 NUDT16Q96DE0 195 aaKnown RBP23.57■■□□□ 1.36
CBX1-202ENST00000393408 COG3Q96JB2 828 aa23.56■■□□□ 1.36
CBX1-202ENST00000393408 KIF2CQ99661 725 aa23.56■■□□□ 1.36
CBX1-202ENST00000393408 TRAK2O60296 914 aa23.55■■□□□ 1.36
CBX1-202ENST00000393408 API5Q9BZZ5 524 aaKnown RBP23.55■■□□□ 1.36
CBX1-202ENST00000393408 DIP2BQ9P265 1576 aa23.55■■□□□ 1.36
CBX1-202ENST00000393408 ITSN1Q15811 1721 aa23.55■■□□□ 1.36
CBX1-202ENST00000393408 TSPOAP1O95153 1857 aa23.54■■□□□ 1.36
CBX1-202ENST00000393408 GOLGA6L3A6NEY3 463 aa23.54■■□□□ 1.36
CBX1-202ENST00000393408 RRS1Q15050 365 aaKnown RBP23.54■■□□□ 1.36
CBX1-202ENST00000393408 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
CBX1-202ENST00000393408 FAM69CQ0P6D2 419 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 TBC1D9Q6ZT07 1266 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 KIF24Q5T7B8 1368 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 FAM83GA6ND36 823 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 TXNDC2Q86VQ3 553 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
CBX1-202ENST00000393408 DDX11L8A8MPP1 907 aa23.52■■□□□ 1.36
CBX1-202ENST00000393408 TECPR2O15040 1411 aa23.52■■□□□ 1.36
CBX1-202ENST00000393408 XRCC6P12956 609 aaKnown RBP eCLIP23.52■■□□□ 1.36
CBX1-202ENST00000393408 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.52■■□□□ 1.36
CBX1-202ENST00000393408 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
CBX1-202ENST00000393408 CIZ1Q9ULV3 898 aaPredicted RBP23.52■■□□□ 1.36
CBX1-202ENST00000393408 SIRT1Q96EB6 747 aa23.51■■□□□ 1.35
CBX1-202ENST00000393408 HSP90AB1P08238 724 aaKnown RBP23.5■■□□□ 1.35
CBX1-202ENST00000393408 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
CBX1-202ENST00000393408 TNPO1Q92973 898 aaKnown RBP23.47■■□□□ 1.35
CBX1-202ENST00000393408 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.47■■□□□ 1.35
CBX1-202ENST00000393408 CDC45O75419 566 aa23.47■■□□□ 1.35
CBX1-202ENST00000393408 CD2BP2O95400 341 aaKnown RBP23.47■■□□□ 1.35
CBX1-202ENST00000393408 MLECQ14165 292 aa23.47■■□□□ 1.35
CBX1-202ENST00000393408 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
CBX1-202ENST00000393408 DCTPP1Q9H773 170 aa23.46■■□□□ 1.35
CBX1-202ENST00000393408 RAB3GAP1Q15042 981 aa23.45■■□□□ 1.35
CBX1-202ENST00000393408 INTS3Q68E01 1043 aaKnown RBP23.45■■□□□ 1.35
CBX1-202ENST00000393408 GSPT1P15170 499 aaKnown RBP23.45■■□□□ 1.34
CBX1-202ENST00000393408 ARXQ96QS3 562 aa23.45■■□□□ 1.34
CBX1-202ENST00000393408 RGS12O14924 1447 aa23.45■■□□□ 1.34
CBX1-202ENST00000393408 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
CBX1-202ENST00000393408 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
CBX1-202ENST00000393408 K7ELQ4 463 aaPredicted RBP23.43■■□□□ 1.34
CBX1-202ENST00000393408 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
CBX1-202ENST00000393408 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
CBX1-202ENST00000393408 RRAGDQ9NQL2 400 aaPredicted RBP23.42■■□□□ 1.34
CBX1-202ENST00000393408 RBM42Q9BTD8 480 aaKnown RBP23.42■■□□□ 1.34
CBX1-202ENST00000393408 PANK2Q9BZ23 570 aa23.42■■□□□ 1.34
CBX1-202ENST00000393408 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
CBX1-202ENST00000393408 GBP4Q96PP9 640 aa23.41■■□□□ 1.34
CBX1-202ENST00000393408 CHL1O00533 1208 aa23.41■■□□□ 1.34
CBX1-202ENST00000393408 MRE11P49959 708 aa23.41■■□□□ 1.34
CBX1-202ENST00000393408 ANKRD44Q8N8A2 993 aa23.41■■□□□ 1.34
CBX1-202ENST00000393408 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
CBX1-202ENST00000393408 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
CBX1-202ENST00000393408 KIAA0232Q92628 1395 aa23.4■■□□□ 1.34
CBX1-202ENST00000393408 TOPAZ1Q8N9V7 1692 aa23.4■■□□□ 1.34
CBX1-202ENST00000393408 RGPD1P0DJD0 1748 aa23.39■■□□□ 1.34
CBX1-202ENST00000393408 KRT24Q2M2I5 525 aa23.39■■□□□ 1.34
CBX1-202ENST00000393408 OVOS2A0A0J9YW53 1432 aa23.39■■□□□ 1.33
CBX1-202ENST00000393408 OVOS2Q6IE36 1432 aa23.39■■□□□ 1.33
CBX1-202ENST00000393408 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.33
CBX1-202ENST00000393408 EIF5BO60841 1220 aaKnown RBP23.39■■□□□ 1.33
CBX1-202ENST00000393408 HSP90AA1P07900 732 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms