RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 U2AF1Q01081 240 aaKnown RBP eCLIP30.13■■■□□ 2.41
PICALM-202ENST00000393346 SSH2Q76I76 1423 aa30.12■■■□□ 2.41
PICALM-202ENST00000393346 EMILIN1Q9Y6C2 1016 aa30.11■■■□□ 2.41
PICALM-202ENST00000393346 COL3A1P02461 1466 aaPredicted RBP30.11■■■□□ 2.41
PICALM-202ENST00000393346 STRCP1A6NGW2 1772 aa30.11■■■□□ 2.41
PICALM-202ENST00000393346 U2SURPO15042 1029 aaKnown RBP30.11■■■□□ 2.41
PICALM-202ENST00000393346 MYH16Q9H6N6 1097 aa30.1■■■□□ 2.41
PICALM-202ENST00000393346 USP19O94966 1318 aa30.09■■■□□ 2.41
PICALM-202ENST00000393346 PNPLA6Q8IY17 1366 aa30.09■■■□□ 2.41
PICALM-202ENST00000393346 RRS1Q15050 365 aaKnown RBP30.09■■■□□ 2.41
PICALM-202ENST00000393346 ESCO1Q5FWF5 840 aa30.08■■■□□ 2.41
PICALM-202ENST00000393346 PHF8Q9UPP1 1060 aa30.08■■■□□ 2.41
PICALM-202ENST00000393346 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
PICALM-202ENST00000393346 DIAPH1O60610 1272 aaKnown RBP30.08■■■□□ 2.41
PICALM-202ENST00000393346 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
PICALM-202ENST00000393346 AATKQ6ZMQ8 1374 aa30.07■■■□□ 2.4
PICALM-202ENST00000393346 RLBP1P12271 317 aa30.07■■■□□ 2.4
PICALM-202ENST00000393346 OVOS2A0A0J9YW53 1432 aa30.06■■■□□ 2.4
PICALM-202ENST00000393346 OVOS2Q6IE36 1432 aa30.06■■■□□ 2.4
PICALM-202ENST00000393346 GSE1Q14687 1217 aa30.05■■■□□ 2.4
PICALM-202ENST00000393346 PCDHB15Q9Y5E8 787 aa30.05■■■□□ 2.4
PICALM-202ENST00000393346 SOX12O15370 315 aa30.04■■■□□ 2.4
PICALM-202ENST00000393346 C19orf44Q9H6X5 657 aa30.03■■■□□ 2.4
PICALM-202ENST00000393346 TNNQ9UQP3 1299 aa30.03■■■□□ 2.4
PICALM-202ENST00000393346 BCL2L13Q9BXK5 485 aa30.02■■■□□ 2.4
PICALM-202ENST00000393346 PIK3C2AO00443 1686 aa30.01■■■□□ 2.4
PICALM-202ENST00000393346 TMEM94Q12767 1356 aa30.01■■■□□ 2.39
PICALM-202ENST00000393346 SEC24BO95487 1268 aa30■■■□□ 2.39
PICALM-202ENST00000393346 CT47B1P0C2W7 299 aaPredicted RBP30■■■□□ 2.39
PICALM-202ENST00000393346 ORAI2Q96SN7 254 aa30■■■□□ 2.39
PICALM-202ENST00000393346 CDK12Q9NYV4 1490 aaPredicted RBP29.99■■■□□ 2.39
PICALM-202ENST00000393346 NLRP6P59044 892 aa29.98■■■□□ 2.39
PICALM-202ENST00000393346 NUTM2GQ5VZR2 741 aa29.98■■■□□ 2.39
PICALM-202ENST00000393346 RWDD1Q9H446 243 aaPredicted RBP29.98■■■□□ 2.39
PICALM-202ENST00000393346 ABTB2Q8N961 1025 aa29.97■■■□□ 2.39
PICALM-202ENST00000393346 PSME1Q06323 249 aa29.97■■■□□ 2.39
PICALM-202ENST00000393346 USP31Q70CQ4 1352 aa29.96■■■□□ 2.39
PICALM-202ENST00000393346 MVPQ14764 893 aaKnown RBP29.96■■■□□ 2.39
PICALM-202ENST00000393346 PDZRN3Q9UPQ7 1066 aa29.96■■■□□ 2.39
PICALM-202ENST00000393346 ZKSCAN2Q63HK3 967 aa29.95■■■□□ 2.39
PICALM-202ENST00000393346 FOXO3O43524 673 aa29.94■■■□□ 2.38
PICALM-202ENST00000393346 PLEKHF1Q96S99 279 aa29.94■■■□□ 2.38
PICALM-202ENST00000393346 ATF3P18847 181 aa29.94■■■□□ 2.38
PICALM-202ENST00000393346 FRAT2O75474 233 aaPredicted RBP29.93■■■□□ 2.38
PICALM-202ENST00000393346 BECN1Q14457 450 aa29.93■■■□□ 2.38
PICALM-202ENST00000393346 IL13P35225 146 aa29.91■■■□□ 2.38
PICALM-202ENST00000393346 DZIP1LQ8IYY4 767 aaKnown RBP29.91■■■□□ 2.38
PICALM-202ENST00000393346 IL27Q8NEV9 243 aa29.91■■■□□ 2.38
PICALM-202ENST00000393346 TMPOP42166 694 aaKnown RBP29.9■■■□□ 2.38
PICALM-202ENST00000393346 MARF1Q9Y4F3 1742 aaKnown RBP29.89■■■□□ 2.38
PICALM-202ENST00000393346 HMOX1P09601 288 aa29.89■■■□□ 2.38
PICALM-202ENST00000393346 XPCQ01831 940 aaPredicted RBP29.89■■■□□ 2.38
PICALM-202ENST00000393346 C1orf167Q5SNV9 1468 aa29.89■■■□□ 2.38
PICALM-202ENST00000393346 FTSJ3Q8IY81 847 aaKnown RBP29.89■■■□□ 2.37
PICALM-202ENST00000393346 TSR2Q969E8 191 aaKnown RBP29.88■■■□□ 2.37
PICALM-202ENST00000393346 UPF2Q9HAU5 1272 aaKnown RBP29.88■■■□□ 2.37
PICALM-202ENST00000393346 PEAK1Q9H792 1746 aa29.88■■■□□ 2.37
PICALM-202ENST00000393346 FCHSD2O94868 740 aa29.88■■■□□ 2.37
PICALM-202ENST00000393346 TRIM35Q9UPQ4 493 aa29.88■■■□□ 2.37
PICALM-202ENST00000393346 NCOA3Q9Y6Q9 1424 aa29.87■■■□□ 2.37
PICALM-202ENST00000393346 HSP90AB2PQ58FF8 381 aa29.87■■■□□ 2.37
PICALM-202ENST00000393346 PNNQ9H307 717 aaKnown RBP29.87■■■□□ 2.37
PICALM-202ENST00000393346 MAP3K19Q56UN5 1328 aa29.87■■■□□ 2.37
PICALM-202ENST00000393346 XIRP1Q702N8 1843 aaKnown RBP29.86■■■□□ 2.37
PICALM-202ENST00000393346 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
PICALM-202ENST00000393346 EXOSC9Q06265 439 aaKnown RBP29.86■■■□□ 2.37
PICALM-202ENST00000393346 IL16Q14005 1332 aa29.86■■■□□ 2.37
PICALM-202ENST00000393346 LRRC7Q96NW7 1537 aa29.86■■■□□ 2.37
PICALM-202ENST00000393346 RSPH6AQ9H0K4 717 aa29.85■■■□□ 2.37
PICALM-202ENST00000393346 SMC4Q9NTJ3 1288 aa29.85■■■□□ 2.37
PICALM-202ENST00000393346 PRKAR2BP31323 418 aa29.84■■■□□ 2.37
PICALM-202ENST00000393346 TBC1D32Q96NH3 1257 aa29.84■■■□□ 2.37
PICALM-202ENST00000393346 DCCP43146 1447 aa29.83■■■□□ 2.37
PICALM-202ENST00000393346 CADPS2Q86UW7 1296 aa29.83■■■□□ 2.37
PICALM-202ENST00000393346 MSH6P52701 1360 aa29.83■■■□□ 2.37
PICALM-202ENST00000393346 MST1RQ04912 1400 aa29.83■■■□□ 2.37
PICALM-202ENST00000393346 EIF4A2Q14240 407 aaKnown RBP29.83■■■□□ 2.37
PICALM-202ENST00000393346 USP54Q70EL1 1684 aa29.83■■■□□ 2.37
PICALM-202ENST00000393346 AMPHP49418 695 aa29.82■■■□□ 2.36
PICALM-202ENST00000393346 KIF1AQ12756 1690 aa29.81■■■□□ 2.36
PICALM-202ENST00000393346 TRIM27P14373 513 aa29.8■■■□□ 2.36
PICALM-202ENST00000393346 SSH1Q8WYL5 1049 aa29.8■■■□□ 2.36
PICALM-202ENST00000393346 DDX19BQ9UMR2 479 aa29.8■■■□□ 2.36
PICALM-202ENST00000393346 LMOD2Q6P5Q4 547 aa29.79■■■□□ 2.36
PICALM-202ENST00000393346 HDAC1Q13547 482 aaPredicted RBP29.79■■■□□ 2.36
PICALM-202ENST00000393346 SBNO1A3KN83 1393 aa29.79■■■□□ 2.36
PICALM-202ENST00000393346 FLT4P35916 1363 aa29.78■■■□□ 2.36
PICALM-202ENST00000393346 ATF7IPQ6VMQ6 1270 aa29.78■■■□□ 2.36
PICALM-202ENST00000393346 KRT28Q7Z3Y7 464 aa29.78■■■□□ 2.36
PICALM-202ENST00000393346 PLEKHG5O94827 1062 aa29.77■■■□□ 2.36
PICALM-202ENST00000393346 RIPK4P57078 832 aa29.77■■■□□ 2.36
PICALM-202ENST00000393346 PHACTR3Q96KR7 559 aa29.77■■■□□ 2.36
PICALM-202ENST00000393346 LTN1O94822 1766 aa29.75■■■□□ 2.35
PICALM-202ENST00000393346 DDX17Q92841 729 aaKnown RBP29.74■■■□□ 2.35
PICALM-202ENST00000393346 TRPM3Q9HCF6 1732 aaPredicted RBP29.74■■■□□ 2.35
PICALM-202ENST00000393346 SULT6B1Q6IMI4 303 aa29.73■■■□□ 2.35
PICALM-202ENST00000393346 ITPRIPQ8IWB1 547 aa29.73■■■□□ 2.35
PICALM-202ENST00000393346 ANTXR1Q9H6X2 564 aa29.73■■■□□ 2.35
PICALM-202ENST00000393346 NOB1Q9ULX3 412 aaKnown RBP29.73■■■□□ 2.35
PICALM-202ENST00000393346 AEBP1Q8IUX7 1158 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms