RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-203ENST00000393287 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
ATXN3-203ENST00000393287 CHRNA2Q15822 529 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 A0A087WZG4 1122 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 EMILIN1Q9Y6C2 1016 aa9.99□□□□□ -0.81
ATXN3-203ENST00000393287 INO80Q9ULG1 1556 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-203ENST00000393287 FAM135BQ49AJ0 1406 aa9.98□□□□□ -0.81
ATXN3-203ENST00000393287 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
ATXN3-203ENST00000393287 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
ATXN3-203ENST00000393287 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
ATXN3-203ENST00000393287 FYB1O15117 783 aa9.98□□□□□ -0.81
ATXN3-203ENST00000393287 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
ATXN3-203ENST00000393287 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-203ENST00000393287 ANKRD24Q8TF21 1146 aa9.97□□□□□ -0.81
ATXN3-203ENST00000393287 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
ATXN3-203ENST00000393287 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
ATXN3-203ENST00000393287 IFT57Q9NWB7 429 aa9.97□□□□□ -0.81
ATXN3-203ENST00000393287 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.81
ATXN3-203ENST00000393287 GNL3LQ9NVN8 582 aaKnown RBP9.96□□□□□ -0.81
ATXN3-203ENST00000393287 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.81
ATXN3-203ENST00000393287 TET3O43151 1660 aa9.96□□□□□ -0.81
ATXN3-203ENST00000393287 BTBD11A6QL63 1104 aa9.96□□□□□ -0.81
ATXN3-203ENST00000393287 HIP1O00291 1037 aa9.96□□□□□ -0.82
ATXN3-203ENST00000393287 TWISTNBQ3B726 338 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-203ENST00000393287 NKTRP30414 1462 aaKnown RBP9.96□□□□□ -0.82
ATXN3-203ENST00000393287 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
ATXN3-203ENST00000393287 APBB1O00213 710 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 ELL2O00472 640 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-203ENST00000393287 ROBO2Q9HCK4 1378 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 MAP3K4Q9Y6R4 1608 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 IFNL2Q8IZJ0 200 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 FLT4P35916 1363 aa9.95□□□□□ -0.82
ATXN3-203ENST00000393287 ST18O60284 1047 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 DIAPH3Q9NSV4 1193 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 CDC42BPBQ9Y5S2 1711 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 RNF20Q5VTR2 975 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 SYNE3Q6ZMZ3 975 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 PDE3AQ14432 1141 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 DDB1Q16531 1140 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
ATXN3-203ENST00000393287 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-203ENST00000393287 PLEKHH1Q9ULM0 1364 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 IL16Q14005 1332 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 REC8O95072 547 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 HDGFL1Q5TGJ6 251 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 NRDCO43847 1150 aa9.93□□□□□ -0.82
ATXN3-203ENST00000393287 ABCA6Q8N139 1617 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 SOS1Q07889 1333 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-203ENST00000393287 ALDH1L2Q3SY69 923 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 EDC4Q6P2E9 1401 aaKnown RBP9.92□□□□□ -0.82
ATXN3-203ENST00000393287 IQGAP3Q86VI3 1631 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 IL2RBP14784 551 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-203ENST00000393287 IP6K1Q92551 441 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 BTG4Q9NY30 223 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 ADGRB3O60242 1522 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 GCC1Q96CN9 775 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 ADGRL3Q9HAR2 1447 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 A0A1W2PP64 1363 aa9.92□□□□□ -0.82
ATXN3-203ENST00000393287 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 UNC13BO14795 1591 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 GNAI2P04899 355 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 ANKRD45Q5TZF3 282 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 GBP4Q96PP9 640 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 CTDP1Q9Y5B0 961 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-203ENST00000393287 ZNF772Q68DY9 489 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-203ENST00000393287 CPLX2Q6PUV4 134 aaKnown RBP9.91□□□□□ -0.82
ATXN3-203ENST00000393287 BRINP3Q76B58 766 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 CROCC2H7BZ55 1655 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 SRCIN1Q9C0H9 1055 aa9.91□□□□□ -0.82
ATXN3-203ENST00000393287 ZSCAN25Q6NSZ9 544 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 ZCRB1Q8TBF4 217 aaKnown RBP9.9□□□□□ -0.82
ATXN3-203ENST00000393287 ZKSCAN1P17029 563 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-203ENST00000393287 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 SLC3A2P08195 630 aaKnown RBP9.9□□□□□ -0.82
ATXN3-203ENST00000393287 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 USP21Q9UK80 565 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 NPC1L1Q9UHC9 1359 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 FMNL2Q96PY5 1086 aa9.9□□□□□ -0.82
ATXN3-203ENST00000393287 KIF1BO60333 1816 aa9.9□□□□□ -0.83
ATXN3-203ENST00000393287 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.83
ATXN3-203ENST00000393287 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.83
ATXN3-203ENST00000393287 SYAP1Q96A49 352 aaPredicted RBP9.9□□□□□ -0.83
ATXN3-203ENST00000393287 ZC3H13Q5T200 1668 aaKnown RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 TMPOP42166 694 aaKnown RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 AKAP17AQ02040 695 aaKnown RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 TRPC5Q9UL62 973 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 SYNMO15061 1565 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 ZPR1O75312 459 aa9.89□□□□□ -0.83
ATXN3-203ENST00000393287 INTS3Q68E01 1043 aaKnown RBP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.89□□□□□ -0.83
ATXN3-203ENST00000393287 REREQ9P2R6 1566 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms