RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
SYT1-202ENST00000393240 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
SYT1-202ENST00000393240 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
SYT1-202ENST00000393240 FOXO3O43524 673 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 AMPHP49418 695 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 MST1RQ04912 1400 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 STRCQ7RTU9 1775 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
SYT1-202ENST00000393240 KCNH5Q8NCM2 988 aa12.63□□□□□ -0.39
SYT1-202ENST00000393240 KIF1AQ12756 1690 aa12.62□□□□□ -0.39
SYT1-202ENST00000393240 SOX12O15370 315 aa12.62□□□□□ -0.39
SYT1-202ENST00000393240 NUTM2GQ5VZR2 741 aa12.62□□□□□ -0.39
SYT1-202ENST00000393240 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
SYT1-202ENST00000393240 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
SYT1-202ENST00000393240 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
SYT1-202ENST00000393240 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
SYT1-202ENST00000393240 MSH6P52701 1360 aa12.61□□□□□ -0.39
SYT1-202ENST00000393240 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
SYT1-202ENST00000393240 HOXC9P31274 260 aa12.6□□□□□ -0.39
SYT1-202ENST00000393240 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
SYT1-202ENST00000393240 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
SYT1-202ENST00000393240 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
SYT1-202ENST00000393240 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
SYT1-202ENST00000393240 PLIN1O60240 522 aa12.59□□□□□ -0.39
SYT1-202ENST00000393240 IP6K1Q92551 441 aa12.58□□□□□ -0.39
SYT1-202ENST00000393240 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.39
SYT1-202ENST00000393240 KDRP35968 1356 aa12.58□□□□□ -0.39
SYT1-202ENST00000393240 NFAT5O94916 1531 aa12.58□□□□□ -0.4
SYT1-202ENST00000393240 AEBP1Q8IUX7 1158 aa12.58□□□□□ -0.4
SYT1-202ENST00000393240 USP19O94966 1318 aa12.58□□□□□ -0.4
SYT1-202ENST00000393240 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
SYT1-202ENST00000393240 EXOC6Q8TAG9 804 aa12.57□□□□□ -0.4
SYT1-202ENST00000393240 SLIT3O75094 1523 aa12.57□□□□□ -0.4
SYT1-202ENST00000393240 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
SYT1-202ENST00000393240 RARSP54136 660 aaKnown RBP12.57□□□□□ -0.4
SYT1-202ENST00000393240 EYA1Q99502 592 aa12.57□□□□□ -0.4
SYT1-202ENST00000393240 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
SYT1-202ENST00000393240 GCP02774 474 aa12.56□□□□□ -0.4
SYT1-202ENST00000393240 B4GALNT3Q6L9W6 998 aa12.56□□□□□ -0.4
SYT1-202ENST00000393240 BCAR3O75815 825 aa12.56□□□□□ -0.4
SYT1-202ENST00000393240 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
SYT1-202ENST00000393240 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
SYT1-202ENST00000393240 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
SYT1-202ENST00000393240 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
SYT1-202ENST00000393240 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
SYT1-202ENST00000393240 GNAI1P63096 354 aa12.55□□□□□ -0.4
SYT1-202ENST00000393240 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
SYT1-202ENST00000393240 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
SYT1-202ENST00000393240 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
SYT1-202ENST00000393240 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
SYT1-202ENST00000393240 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
SYT1-202ENST00000393240 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
SYT1-202ENST00000393240 C20orf194Q5TEA3 1177 aa12.53□□□□□ -0.4
SYT1-202ENST00000393240 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
SYT1-202ENST00000393240 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
SYT1-202ENST00000393240 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
SYT1-202ENST00000393240 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
SYT1-202ENST00000393240 ALS2Q96Q42 1657 aa12.52□□□□□ -0.41
SYT1-202ENST00000393240 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
SYT1-202ENST00000393240 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
SYT1-202ENST00000393240 SLAIN2Q9P270 581 aa12.51□□□□□ -0.41
SYT1-202ENST00000393240 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
SYT1-202ENST00000393240 LTN1O94822 1766 aa12.51□□□□□ -0.41
SYT1-202ENST00000393240 PXDNQ92626 1479 aa12.51□□□□□ -0.41
SYT1-202ENST00000393240 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
SYT1-202ENST00000393240 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
SYT1-202ENST00000393240 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
SYT1-202ENST00000393240 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
SYT1-202ENST00000393240 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
SYT1-202ENST00000393240 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
SYT1-202ENST00000393240 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
SYT1-202ENST00000393240 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
SYT1-202ENST00000393240 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
SYT1-202ENST00000393240 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
SYT1-202ENST00000393240 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
SYT1-202ENST00000393240 MED1Q15648 1581 aaPredicted RBP12.49□□□□□ -0.41
SYT1-202ENST00000393240 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
SYT1-202ENST00000393240 DCTN1Q14203 1278 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 RTF1Q92541 710 aaKnown RBP12.48□□□□□ -0.41
SYT1-202ENST00000393240 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 CHL1O00533 1208 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 MS4A1P11836 297 aa12.48□□□□□ -0.41
SYT1-202ENST00000393240 FRAT1Q92837 279 aaPredicted RBP12.48□□□□□ -0.41
SYT1-202ENST00000393240 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
SYT1-202ENST00000393240 AAMPQ13685 434 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 VAMP4O75379 141 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 SMC4Q9NTJ3 1288 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 CRB1P82279 1406 aa12.47□□□□□ -0.41
SYT1-202ENST00000393240 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
SYT1-202ENST00000393240 MCM10Q7L590 875 aa12.46□□□□□ -0.41
SYT1-202ENST00000393240 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
SYT1-202ENST00000393240 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
SYT1-202ENST00000393240 BCL2L13Q9BXK5 485 aa12.46□□□□□ -0.42
SYT1-202ENST00000393240 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms