RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 NFE2L2Q16236 605 aa25.97■■□□□ 1.75
PTPN11-202ENST00000392597 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
PTPN11-202ENST00000392597 PIK3C2AO00443 1686 aa25.95■■□□□ 1.75
PTPN11-202ENST00000392597 CADPS2Q86UW7 1296 aa25.94■■□□□ 1.74
PTPN11-202ENST00000392597 PEAK1Q9H792 1746 aa25.94■■□□□ 1.74
PTPN11-202ENST00000392597 HMOX1P09601 288 aa25.94■■□□□ 1.74
PTPN11-202ENST00000392597 ATF3P18847 181 aa25.93■■□□□ 1.74
PTPN11-202ENST00000392597 CALD1Q05682 793 aaKnown RBP25.92■■□□□ 1.74
PTPN11-202ENST00000392597 PHACTR3Q96KR7 559 aa25.91■■□□□ 1.74
PTPN11-202ENST00000392597 CANXP27824 592 aaKnown RBP25.91■■□□□ 1.74
PTPN11-202ENST00000392597 RGPD1P0DJD0 1748 aa25.9■■□□□ 1.74
PTPN11-202ENST00000392597 EIF4A2Q14240 407 aaKnown RBP25.9■■□□□ 1.74
PTPN11-202ENST00000392597 LMOD3Q0VAK6 560 aa25.89■■□□□ 1.74
PTPN11-202ENST00000392597 TSR2Q969E8 191 aaKnown RBP25.89■■□□□ 1.74
PTPN11-202ENST00000392597 KDM2BQ8NHM5 1336 aa25.89■■□□□ 1.74
PTPN11-202ENST00000392597 AAMPQ13685 434 aa25.89■■□□□ 1.73
PTPN11-202ENST00000392597 SBNO1A3KN83 1393 aa25.88■■□□□ 1.73
PTPN11-202ENST00000392597 CENPQQ7L2Z9 268 aaPredicted RBP25.88■■□□□ 1.73
PTPN11-202ENST00000392597 MST1RQ04912 1400 aa25.88■■□□□ 1.73
PTPN11-202ENST00000392597 FLT4P35916 1363 aa25.87■■□□□ 1.73
PTPN11-202ENST00000392597 KIF24Q5T7B8 1368 aa25.87■■□□□ 1.73
PTPN11-202ENST00000392597 TCERG1O14776 1098 aaKnown RBP25.87■■□□□ 1.73
PTPN11-202ENST00000392597 EXOSC9Q06265 439 aaKnown RBP25.87■■□□□ 1.73
PTPN11-202ENST00000392597 CERKQ8TCT0 537 aa25.87■■□□□ 1.73
PTPN11-202ENST00000392597 DLG5Q8TDM6 1919 aa25.87■■□□□ 1.73
PTPN11-202ENST00000392597 MARF1Q9Y4F3 1742 aaKnown RBP25.86■■□□□ 1.73
PTPN11-202ENST00000392597 PHF8Q9UPP1 1060 aa25.85■■□□□ 1.73
PTPN11-202ENST00000392597 MAP3K19Q56UN5 1328 aa25.85■■□□□ 1.73
PTPN11-202ENST00000392597 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
PTPN11-202ENST00000392597 FRAT1Q92837 279 aaPredicted RBP25.84■■□□□ 1.73
PTPN11-202ENST00000392597 ARHGEF10O15013 1369 aa25.84■■□□□ 1.73
PTPN11-202ENST00000392597 HSP90AB2PQ58FF8 381 aa25.83■■□□□ 1.72
PTPN11-202ENST00000392597 ZNF428Q96B54 188 aa25.83■■□□□ 1.72
PTPN11-202ENST00000392597 MS4A1P11836 297 aa25.82■■□□□ 1.72
PTPN11-202ENST00000392597 NLRP6P59044 892 aa25.82■■□□□ 1.72
PTPN11-202ENST00000392597 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
PTPN11-202ENST00000392597 PANK1Q8TE04 598 aa25.81■■□□□ 1.72
PTPN11-202ENST00000392597 GNAI1P63096 354 aa25.81■■□□□ 1.72
PTPN11-202ENST00000392597 SULT6B1Q6IMI4 303 aa25.81■■□□□ 1.72
PTPN11-202ENST00000392597 SLAIN2Q9P270 581 aa25.8■■□□□ 1.72
PTPN11-202ENST00000392597 ZKSCAN2Q63HK3 967 aa25.79■■□□□ 1.72
PTPN11-202ENST00000392597 ZNF853P0CG23 659 aa25.79■■□□□ 1.72
PTPN11-202ENST00000392597 BCL2L13Q9BXK5 485 aa25.79■■□□□ 1.72
PTPN11-202ENST00000392597 ALDH1L2Q3SY69 923 aa25.78■■□□□ 1.72
PTPN11-202ENST00000392597 CLUAP1Q96AJ1 413 aa25.78■■□□□ 1.72
PTPN11-202ENST00000392597 SMC4Q9NTJ3 1288 aa25.78■■□□□ 1.72
PTPN11-202ENST00000392597 COG6Q9Y2V7 657 aa25.78■■□□□ 1.72
PTPN11-202ENST00000392597 TOM1O60784 492 aa25.77■■□□□ 1.72
PTPN11-202ENST00000392597 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
PTPN11-202ENST00000392597 ABTB2Q8N961 1025 aa25.77■■□□□ 1.72
PTPN11-202ENST00000392597 KDRP35968 1356 aa25.76■■□□□ 1.71
PTPN11-202ENST00000392597 SOX12O15370 315 aa25.76■■□□□ 1.71
PTPN11-202ENST00000392597 AMPHP49418 695 aa25.76■■□□□ 1.71
PTPN11-202ENST00000392597 ESCO1Q5FWF5 840 aa25.76■■□□□ 1.71
PTPN11-202ENST00000392597 SSH1Q8WYL5 1049 aa25.76■■□□□ 1.71
PTPN11-202ENST00000392597 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
PTPN11-202ENST00000392597 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
PTPN11-202ENST00000392597 BRPF1P55201 1214 aaPredicted RBP25.74■■□□□ 1.71
PTPN11-202ENST00000392597 ORAI2Q96SN7 254 aa25.74■■□□□ 1.71
PTPN11-202ENST00000392597 KIF16BQ96L93 1317 aa25.74■■□□□ 1.71
PTPN11-202ENST00000392597 RTL1A6NKG5 1358 aa25.74■■□□□ 1.71
PTPN11-202ENST00000392597 RLBP1P12271 317 aa25.74■■□□□ 1.71
PTPN11-202ENST00000392597 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
PTPN11-202ENST00000392597 PAK3O75914 559 aaPredicted RBP25.72■■□□□ 1.71
PTPN11-202ENST00000392597 DZIP1LQ8IYY4 767 aaKnown RBP25.72■■□□□ 1.71
PTPN11-202ENST00000392597 THUMPD2Q9BTF0 503 aaKnown RBP25.72■■□□□ 1.71
PTPN11-202ENST00000392597 MVPQ14764 893 aaKnown RBP25.71■■□□□ 1.71
PTPN11-202ENST00000392597 BRINP3Q76B58 766 aa25.71■■□□□ 1.71
PTPN11-202ENST00000392597 LAS1LQ9Y4W2 734 aaKnown RBP25.71■■□□□ 1.71
PTPN11-202ENST00000392597 UBAP1LF5GYI3 381 aa25.7■■□□□ 1.71
PTPN11-202ENST00000392597 IPO8O15397 1037 aaKnown RBP25.7■■□□□ 1.71
PTPN11-202ENST00000392597 FTSJ3Q8IY81 847 aaKnown RBP25.7■■□□□ 1.71
PTPN11-202ENST00000392597 HOXC9P31274 260 aa25.7■■□□□ 1.7
PTPN11-202ENST00000392597 PSME1Q06323 249 aa25.7■■□□□ 1.7
PTPN11-202ENST00000392597 ATF7IPQ6VMQ6 1270 aa25.7■■□□□ 1.7
PTPN11-202ENST00000392597 MBIPQ9NS73 344 aa25.7■■□□□ 1.7
PTPN11-202ENST00000392597 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
PTPN11-202ENST00000392597 TNNQ9UQP3 1299 aa25.68■■□□□ 1.7
PTPN11-202ENST00000392597 NFAT5O94916 1531 aa25.68■■□□□ 1.7
PTPN11-202ENST00000392597 TRIM27P14373 513 aa25.68■■□□□ 1.7
PTPN11-202ENST00000392597 VAMP4O75379 141 aa25.67■■□□□ 1.7
PTPN11-202ENST00000392597 NUTM2GQ5VZR2 741 aa25.67■■□□□ 1.7
PTPN11-202ENST00000392597 EYA1Q99502 592 aa25.67■■□□□ 1.7
PTPN11-202ENST00000392597 PHRF1Q9P1Y6 1649 aaKnown RBP25.67■■□□□ 1.7
PTPN11-202ENST00000392597 LTN1O94822 1766 aa25.66■■□□□ 1.7
PTPN11-202ENST00000392597 FAM83GA6ND36 823 aa25.66■■□□□ 1.7
PTPN11-202ENST00000392597 NOB1Q9ULX3 412 aaKnown RBP25.66■■□□□ 1.7
PTPN11-202ENST00000392597 KCNH5Q8NCM2 988 aa25.64■■□□□ 1.7
PTPN11-202ENST00000392597 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.69
PTPN11-202ENST00000392597 FOXO3O43524 673 aa25.64■■□□□ 1.69
PTPN11-202ENST00000392597 IGHDP01880 384 aa25.63■■□□□ 1.69
PTPN11-202ENST00000392597 DDX19BQ9UMR2 479 aa25.63■■□□□ 1.69
PTPN11-202ENST00000392597 NHSL1Q5SYE7 1610 aa25.63■■□□□ 1.69
PTPN11-202ENST00000392597 GAS2L2Q8NHY3 880 aa25.62■■□□□ 1.69
PTPN11-202ENST00000392597 ARHGAP45Q92619 1136 aa25.62■■□□□ 1.69
PTPN11-202ENST00000392597 CHL1O00533 1208 aa25.62■■□□□ 1.69
PTPN11-202ENST00000392597 PDE4AP27815 886 aa25.62■■□□□ 1.69
PTPN11-202ENST00000392597 DCTN1Q14203 1278 aa25.62■■□□□ 1.69
PTPN11-202ENST00000392597 TRPM3Q9HCF6 1732 aaPredicted RBP25.61■■□□□ 1.69
PTPN11-202ENST00000392597 HAP1P54257 671 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms