RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
BRF1-204ENST00000392557 ATP7BP35670 1465 aa13.64□□□□□ -0.23
BRF1-204ENST00000392557 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
BRF1-204ENST00000392557 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
BRF1-204ENST00000392557 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 UBR1Q8IWV7 1749 aa13.62□□□□□ -0.23
BRF1-204ENST00000392557 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
BRF1-204ENST00000392557 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 KCNA6P17658 529 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 CPS1P31327 1500 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
BRF1-204ENST00000392557 MVPQ14764 893 aaKnown RBP13.61□□□□□ -0.23
BRF1-204ENST00000392557 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
BRF1-204ENST00000392557 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
BRF1-204ENST00000392557 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
BRF1-204ENST00000392557 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
BRF1-204ENST00000392557 IL13P35225 146 aa13.6□□□□□ -0.23
BRF1-204ENST00000392557 HSP90AB2PQ58FF8 381 aa13.6□□□□□ -0.23
BRF1-204ENST00000392557 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
BRF1-204ENST00000392557 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
BRF1-204ENST00000392557 KIF20BQ96Q89 1820 aa13.59□□□□□ -0.23
BRF1-204ENST00000392557 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
BRF1-204ENST00000392557 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
BRF1-204ENST00000392557 MAP2P11137 1827 aaKnown RBP13.59□□□□□ -0.23
BRF1-204ENST00000392557 MED14O60244 1454 aa13.59□□□□□ -0.23
BRF1-204ENST00000392557 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 MCM4P33991 863 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
BRF1-204ENST00000392557 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 TBX22Q9Y458 520 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 TRAK2O60296 914 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
BRF1-204ENST00000392557 APBB1O00213 710 aa13.57□□□□□ -0.24
BRF1-204ENST00000392557 AMPHP49418 695 aa13.57□□□□□ -0.24
BRF1-204ENST00000392557 NLRP6P59044 892 aa13.57□□□□□ -0.24
BRF1-204ENST00000392557 TECPR2O15040 1411 aa13.57□□□□□ -0.24
BRF1-204ENST00000392557 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
BRF1-204ENST00000392557 TRIM44Q96DX7 344 aaPredicted RBP13.57□□□□□ -0.24
BRF1-204ENST00000392557 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
BRF1-204ENST00000392557 TRIM27P14373 513 aa13.56□□□□□ -0.24
BRF1-204ENST00000392557 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
BRF1-204ENST00000392557 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
BRF1-204ENST00000392557 C3P01024 1663 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 ANKRD26Q9UPS8 1709 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.242e-6■■□□□ 12.3
BRF1-204ENST00000392557 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
BRF1-204ENST00000392557 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 MCM10Q7L590 875 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 C1orf115Q9H7X2 142 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 ATF7IPQ6VMQ6 1270 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
BRF1-204ENST00000392557 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
BRF1-204ENST00000392557 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
BRF1-204ENST00000392557 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
BRF1-204ENST00000392557 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
BRF1-204ENST00000392557 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
BRF1-204ENST00000392557 AAMPQ13685 434 aa13.53□□□□□ -0.24
BRF1-204ENST00000392557 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
BRF1-204ENST00000392557 GNAI1P63096 354 aa13.52□□□□□ -0.24
BRF1-204ENST00000392557 ADGRB2O60241 1585 aa13.52□□□□□ -0.24
BRF1-204ENST00000392557 USP6P35125 1406 aa13.52□□□□□ -0.25
BRF1-204ENST00000392557 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
BRF1-204ENST00000392557 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.25
BRF1-204ENST00000392557 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
BRF1-204ENST00000392557 IL16Q14005 1332 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 MAP3K19Q56UN5 1328 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
BRF1-204ENST00000392557 LMOD3Q0VAK6 560 aa13.51□□□□□ -0.25
BRF1-204ENST00000392557 TWISTNBQ3B726 338 aaPredicted RBP13.51□□□□□ -0.25
BRF1-204ENST00000392557 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
BRF1-204ENST00000392557 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
BRF1-204ENST00000392557 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
BRF1-204ENST00000392557 FOXO3O43524 673 aa13.5□□□□□ -0.25
BRF1-204ENST00000392557 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
BRF1-204ENST00000392557 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
BRF1-204ENST00000392557 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
BRF1-204ENST00000392557 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
BRF1-204ENST00000392557 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
BRF1-204ENST00000392557 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
BRF1-204ENST00000392557 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
BRF1-204ENST00000392557 IFT57Q9NWB7 429 aa13.48□□□□□ -0.25
BRF1-204ENST00000392557 VAMP4O75379 141 aa13.48□□□□□ -0.25
BRF1-204ENST00000392557 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms