RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
TMCO1-202ENST00000392129 USP54Q70EL1 1684 aa16.03■□□□□ 0.16
TMCO1-202ENST00000392129 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
TMCO1-202ENST00000392129 MSH6P52701 1360 aa16.02■□□□□ 0.16
TMCO1-202ENST00000392129 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
TMCO1-202ENST00000392129 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
TMCO1-202ENST00000392129 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
TMCO1-202ENST00000392129 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.15
TMCO1-202ENST00000392129 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
TMCO1-202ENST00000392129 MARF1Q9Y4F3 1742 aaKnown RBP16.01■□□□□ 0.15
TMCO1-202ENST00000392129 KIF1AQ12756 1690 aa16■□□□□ 0.15
TMCO1-202ENST00000392129 NFE2L2Q16236 605 aa16■□□□□ 0.15
TMCO1-202ENST00000392129 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
TMCO1-202ENST00000392129 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
TMCO1-202ENST00000392129 HOXC9P31274 260 aa15.99■□□□□ 0.15
TMCO1-202ENST00000392129 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
TMCO1-202ENST00000392129 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
TMCO1-202ENST00000392129 MYH16Q9H6N6 1097 aa15.98■□□□□ 0.15
TMCO1-202ENST00000392129 IL16Q14005 1332 aa15.97■□□□□ 0.15
TMCO1-202ENST00000392129 GCP02774 474 aa15.96■□□□□ 0.15
TMCO1-202ENST00000392129 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
TMCO1-202ENST00000392129 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
TMCO1-202ENST00000392129 RTL1A6NKG5 1358 aa15.96■□□□□ 0.14
TMCO1-202ENST00000392129 EYA1Q99502 592 aa15.96■□□□□ 0.14
TMCO1-202ENST00000392129 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
TMCO1-202ENST00000392129 PLIN1O60240 522 aa15.95■□□□□ 0.14
TMCO1-202ENST00000392129 IP6K1Q92551 441 aa15.95■□□□□ 0.14
TMCO1-202ENST00000392129 DDX17Q92841 729 aaKnown RBP15.95■□□□□ 0.14
TMCO1-202ENST00000392129 NFAT5O94916 1531 aa15.95■□□□□ 0.14
TMCO1-202ENST00000392129 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
TMCO1-202ENST00000392129 TRPM3Q9HCF6 1732 aaPredicted RBP15.94■□□□□ 0.14
TMCO1-202ENST00000392129 USP19O94966 1318 aa15.94■□□□□ 0.14
TMCO1-202ENST00000392129 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
TMCO1-202ENST00000392129 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
TMCO1-202ENST00000392129 KDRP35968 1356 aa15.93■□□□□ 0.14
TMCO1-202ENST00000392129 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 BRINP3Q76B58 766 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 SLIT3O75094 1523 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
TMCO1-202ENST00000392129 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
TMCO1-202ENST00000392129 BCAR3O75815 825 aa15.91■□□□□ 0.14
TMCO1-202ENST00000392129 CALD1Q05682 793 aaKnown RBP15.91■□□□□ 0.14
TMCO1-202ENST00000392129 TSR2Q969E8 191 aaKnown RBP15.91■□□□□ 0.14
TMCO1-202ENST00000392129 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
TMCO1-202ENST00000392129 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
TMCO1-202ENST00000392129 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
TMCO1-202ENST00000392129 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
TMCO1-202ENST00000392129 B4GALNT3Q6L9W6 998 aa15.89■□□□□ 0.13
TMCO1-202ENST00000392129 EXOC6Q8TAG9 804 aa15.89■□□□□ 0.13
TMCO1-202ENST00000392129 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
TMCO1-202ENST00000392129 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
TMCO1-202ENST00000392129 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
TMCO1-202ENST00000392129 LTN1O94822 1766 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 SPATA31A3Q5VYP0 1347 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 PXDNQ92626 1479 aa15.88■□□□□ 0.13
TMCO1-202ENST00000392129 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
TMCO1-202ENST00000392129 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
TMCO1-202ENST00000392129 PHRF1Q9P1Y6 1649 aaKnown RBP15.87■□□□□ 0.13
TMCO1-202ENST00000392129 ZNF853P0CG23 659 aa15.86■□□□□ 0.13
TMCO1-202ENST00000392129 GNAI1P63096 354 aa15.86■□□□□ 0.13
TMCO1-202ENST00000392129 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
TMCO1-202ENST00000392129 DCTN1Q14203 1278 aa15.86■□□□□ 0.13
TMCO1-202ENST00000392129 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
TMCO1-202ENST00000392129 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
TMCO1-202ENST00000392129 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
TMCO1-202ENST00000392129 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
TMCO1-202ENST00000392129 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
TMCO1-202ENST00000392129 CFAP44Q96MT7 982 aa15.85■□□□□ 0.13
TMCO1-202ENST00000392129 MED1Q15648 1581 aaPredicted RBP15.85■□□□□ 0.13
TMCO1-202ENST00000392129 DLG5Q8TDM6 1919 aa15.85■□□□□ 0.13
TMCO1-202ENST00000392129 ZC3H6P61129 1189 aaKnown RBP15.84■□□□□ 0.13
TMCO1-202ENST00000392129 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
TMCO1-202ENST00000392129 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
TMCO1-202ENST00000392129 CCDC136Q96JN2 1154 aa15.84■□□□□ 0.13
TMCO1-202ENST00000392129 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
TMCO1-202ENST00000392129 MCM10Q7L590 875 aa15.82■□□□□ 0.12
TMCO1-202ENST00000392129 CABLES1Q8TDN4 633 aa15.82■□□□□ 0.12
TMCO1-202ENST00000392129 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
TMCO1-202ENST00000392129 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
TMCO1-202ENST00000392129 PDE3AQ14432 1141 aa15.81■□□□□ 0.12
TMCO1-202ENST00000392129 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
TMCO1-202ENST00000392129 BCL2L13Q9BXK5 485 aa15.81■□□□□ 0.12
TMCO1-202ENST00000392129 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
TMCO1-202ENST00000392129 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
TMCO1-202ENST00000392129 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
TMCO1-202ENST00000392129 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
TMCO1-202ENST00000392129 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
TMCO1-202ENST00000392129 CHL1O00533 1208 aa15.79■□□□□ 0.12
TMCO1-202ENST00000392129 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
TMCO1-202ENST00000392129 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
TMCO1-202ENST00000392129 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
TMCO1-202ENST00000392129 ERBB3P21860 1342 aa15.78■□□□□ 0.12
TMCO1-202ENST00000392129 VAMP4O75379 141 aa15.78■□□□□ 0.12
TMCO1-202ENST00000392129 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
TMCO1-202ENST00000392129 CRB1P82279 1406 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms