RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 HIP1O00291 1037 aa15.7■□□□□ 0.1
PTPRN2-203ENST00000389418 CDC45O75419 566 aa15.7■□□□□ 0.1
PTPRN2-203ENST00000389418 WDR7Q9Y4E6 1490 aa15.7■□□□□ 0.1
PTPRN2-203ENST00000389418 NOS1P29475 1434 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 GNAI2P04899 355 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 NUCB2P80303 420 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 RALYLQ86SE5 291 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
PTPRN2-203ENST00000389418 VPS37CA5D8V6 355 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 PES1O00541 588 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 FSD1Q9BTV5 496 aa15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 CTDP1Q9Y5B0 961 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 CCDC47Q96A33 483 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 WASLO00401 505 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 TBC1D2BQ9UPU7 963 aa15.68■□□□□ 0.1
PTPRN2-203ENST00000389418 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 NFXL1Q6ZNB6 911 aa15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 PSMA5P28066 241 aa15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 CNNM1Q9NRU3 951 aa15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-203ENST00000389418 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
PTPRN2-203ENST00000389418 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
PTPRN2-203ENST00000389418 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■□□ 15.9
PTPRN2-203ENST00000389418 NCKAP5LQ9HCH0 1330 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 TPM2P07951 284 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 ANXA1P04083 346 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 BECN2A8MW95 431 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 F6X3S4 739 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 TPM3P06753 285 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 TPD52L1Q16890 204 aaPredicted RBP15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
PTPRN2-203ENST00000389418 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.09
PTPRN2-203ENST00000389418 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
PTPRN2-203ENST00000389418 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
PTPRN2-203ENST00000389418 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
PTPRN2-203ENST00000389418 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
PTPRN2-203ENST00000389418 TPM1P09493 284 aa15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 MCM2P49736 904 aa15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 EXOC6BQ9Y2D4 811 aa15.63■□□□□ 0.09
PTPRN2-203ENST00000389418 SRGAP3O43295 1099 aa15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 GNL3LQ9NVN8 582 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 NFKBIBQ15653 356 aa15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 CEP89Q96ST8 783 aa15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
PTPRN2-203ENST00000389418 ACEP12821 1306 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 BACH2Q9BYV9 841 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 XBP1P17861 261 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 WWC3Q9ULE0 1092 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 C20orf194Q5TEA3 1177 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
PTPRN2-203ENST00000389418 DUSP27Q5VZP5 1158 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 NSD2O96028 1365 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.093e-6■■■■□ 19.7
PTPRN2-203ENST00000389418 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.6■□□□□ 0.09
PTPRN2-203ENST00000389418 SLC3A2P08195 630 aaKnown RBP15.59■□□□□ 0.09
PTPRN2-203ENST00000389418 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
PTPRN2-203ENST00000389418 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
PTPRN2-203ENST00000389418 MPHOSPH8Q99549 860 aa15.59■□□□□ 0.09
PTPRN2-203ENST00000389418 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.09
PTPRN2-203ENST00000389418 UBAP1LF5GYI3 381 aa15.58■□□□□ 0.09
PTPRN2-203ENST00000389418 ATP2B2Q01814 1243 aa15.58■□□□□ 0.09
PTPRN2-203ENST00000389418 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.09
PTPRN2-203ENST00000389418 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 C14orf93Q9H972 538 aaKnown RBP15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 GPTP24298 496 aa15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 IKQ13123 557 aaPredicted RBP15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 SCAF11Q99590 1463 aaKnown RBP15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 NOC3LQ8WTT2 800 aaKnown RBP15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 SSH1Q8WYL5 1049 aa15.58■□□□□ 0.08
PTPRN2-203ENST00000389418 PDCP20941 246 aa15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 NEK4P51957 841 aa15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 RPAP2Q8IXW5 612 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms