RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
FREM1-201ENST00000380875 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
FREM1-201ENST00000380875 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
FREM1-201ENST00000380875 WWC3Q9ULE0 1092 aa11□□□□□ -0.65
FREM1-201ENST00000380875 GNAI2P04899 355 aa11□□□□□ -0.65
FREM1-201ENST00000380875 EXOC5O00471 708 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 CDR1P51861 262 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 TOM1O60784 492 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 DNAI2Q9GZS0 605 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 DEKP35659 375 aaKnown RBP10.99□□□□□ -0.65
FREM1-201ENST00000380875 DZIP1Q86YF9 867 aaKnown RBP10.99□□□□□ -0.65
FREM1-201ENST00000380875 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 C6orf229H3BNL8 230 aa10.99□□□□□ -0.65
FREM1-201ENST00000380875 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
FREM1-201ENST00000380875 RFC4P35249 363 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 METTL24Q5JXM2 366 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 IDH1O75874 414 aaKnown RBP10.98□□□□□ -0.65
FREM1-201ENST00000380875 POLD1P28340 1107 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 STK3Q13188 491 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
FREM1-201ENST00000380875 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
FREM1-201ENST00000380875 SDF4Q9BRK5 362 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
FREM1-201ENST00000380875 ST5P78524 1137 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 CHMP5Q9NZZ3 219 aa10.98□□□□□ -0.65
FREM1-201ENST00000380875 SKOR2Q2VWA4 1001 aaPredicted RBP10.97□□□□□ -0.65
FREM1-201ENST00000380875 CCDC96Q2M329 555 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 CDC45O75419 566 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 PANK1Q8TE04 598 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 SRCIN1Q9C0H9 1055 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 LRPPRCP42704 1394 aaKnown RBP10.97□□□□□ -0.65
FREM1-201ENST00000380875 ERBINQ96RT1 1412 aa10.97□□□□□ -0.65
FREM1-201ENST00000380875 CEBPAP49715 358 aaPredicted RBP10.96□□□□□ -0.65
FREM1-201ENST00000380875 AACSQ86V21 672 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 SEC63Q9UGP8 760 aaKnown RBP10.96□□□□□ -0.65
FREM1-201ENST00000380875 MYO1BO43795 1136 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 NBPF8Q3BBV2 869 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 FEZ1Q99689 392 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
FREM1-201ENST00000380875 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
FREM1-201ENST00000380875 ANKRD62A6NC57 917 aa10.96□□□□□ -0.66
FREM1-201ENST00000380875 FILIP1LQ4L180 1135 aa10.96□□□□□ -0.66
FREM1-201ENST00000380875 MKNK2Q9HBH9 465 aa10.96□□□□□ -0.66
FREM1-201ENST00000380875 NOL7Q9UMY1 257 aaKnown RBP10.96□□□□□ -0.66
FREM1-201ENST00000380875 LIG1P18858 919 aa10.96□□□□□ -0.66
FREM1-201ENST00000380875 AIDAQ96BJ3 306 aa10.96□□□□□ -0.66
FREM1-201ENST00000380875 ZNF287Q9HBT7 754 aa10.95□□□□□ -0.66
FREM1-201ENST00000380875 NEFHP12036 1026 aa10.95□□□□□ -0.66
FREM1-201ENST00000380875 CUL5Q93034 780 aa10.95□□□□□ -0.66
FREM1-201ENST00000380875 STK38Q15208 465 aa10.95□□□□□ -0.66
FREM1-201ENST00000380875 SSR1P43307 286 aaKnown RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 SMARCE1Q969G3 411 aa10.94□□□□□ -0.66
FREM1-201ENST00000380875 ZNF396Q96N95 335 aaPredicted RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 PLEKHH2Q8IVE3 1493 aa10.94□□□□□ -0.66
FREM1-201ENST00000380875 SMC2O95347 1197 aa10.94□□□□□ -0.66
FREM1-201ENST00000380875 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 TRMT112Q9UI30 125 aaKnown RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
FREM1-201ENST00000380875 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 STIM1Q13586 685 aa10.94□□□□□ -0.66
FREM1-201ENST00000380875 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
FREM1-201ENST00000380875 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
FREM1-201ENST00000380875 BIN2Q9UBW5 565 aaPredicted RBP10.93□□□□□ -0.66
FREM1-201ENST00000380875 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
FREM1-201ENST00000380875 MINDY4BA8MYZ0 360 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
FREM1-201ENST00000380875 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 MYD88Q99836 296 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 FOXO3O43524 673 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
FREM1-201ENST00000380875 NESP48681 1621 aa10.93□□□□□ -0.66
FREM1-201ENST00000380875 TCP11L2Q8N4U5 519 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 KRT28Q7Z3Y7 464 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 DEF6Q9H4E7 631 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
FREM1-201ENST00000380875 MNS1Q8NEH6 495 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 SLC12A5Q9H2X9 1139 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 RUSC2Q8N2Y8 1516 aa10.92□□□□□ -0.66
FREM1-201ENST00000380875 PIP4K2AP48426 406 aaPredicted RBP10.91□□□□□ -0.66
FREM1-201ENST00000380875 TTC16Q8NEE8 873 aa10.91□□□□□ -0.66
FREM1-201ENST00000380875 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
FREM1-201ENST00000380875 MPHOSPH6Q99547 160 aaKnown RBP10.91□□□□□ -0.66
FREM1-201ENST00000380875 KINO60870 393 aaKnown RBP10.91□□□□□ -0.66
FREM1-201ENST00000380875 SEPT7Q16181 437 aaKnown RBP10.91□□□□□ -0.66
FREM1-201ENST00000380875 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms