RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF142P52746 1687 aaPredicted RBP18.37■□□□□ 0.53
CLCN4-201ENST00000380829 PANK1Q8TE04 598 aa18.37■□□□□ 0.53
CLCN4-201ENST00000380829 SSH2Q76I76 1423 aa18.36■□□□□ 0.53
CLCN4-201ENST00000380829 SKAP1Q86WV1 359 aa18.36■□□□□ 0.53
CLCN4-201ENST00000380829 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
CLCN4-201ENST00000380829 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
CLCN4-201ENST00000380829 COG6Q9Y2V7 657 aa18.34■□□□□ 0.53
CLCN4-201ENST00000380829 NFE2L2Q16236 605 aa18.33■□□□□ 0.53
CLCN4-201ENST00000380829 TNNQ9UQP3 1299 aa18.33■□□□□ 0.53
CLCN4-201ENST00000380829 IL16Q14005 1332 aa18.33■□□□□ 0.52
CLCN4-201ENST00000380829 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.52
CLCN4-201ENST00000380829 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
CLCN4-201ENST00000380829 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
CLCN4-201ENST00000380829 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
CLCN4-201ENST00000380829 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
CLCN4-201ENST00000380829 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
CLCN4-201ENST00000380829 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
CLCN4-201ENST00000380829 NALCNQ8IZF0 1738 aa18.31■□□□□ 0.52
CLCN4-201ENST00000380829 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
CLCN4-201ENST00000380829 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
CLCN4-201ENST00000380829 RLBP1P12271 317 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 CENPQQ7L2Z9 268 aaPredicted RBP18.3■□□□□ 0.52
CLCN4-201ENST00000380829 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
CLCN4-201ENST00000380829 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
CLCN4-201ENST00000380829 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
CLCN4-201ENST00000380829 NUTM2GQ5VZR2 741 aa18.28■□□□□ 0.52
CLCN4-201ENST00000380829 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
CLCN4-201ENST00000380829 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
CLCN4-201ENST00000380829 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
CLCN4-201ENST00000380829 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
CLCN4-201ENST00000380829 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.51
CLCN4-201ENST00000380829 NLRP6P59044 892 aa18.27■□□□□ 0.51
CLCN4-201ENST00000380829 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.51
CLCN4-201ENST00000380829 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
CLCN4-201ENST00000380829 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
CLCN4-201ENST00000380829 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 IGHDP01880 384 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 GSE1Q14687 1217 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
CLCN4-201ENST00000380829 PDE4AP27815 886 aa18.22■□□□□ 0.51
CLCN4-201ENST00000380829 AMPHP49418 695 aa18.22■□□□□ 0.51
CLCN4-201ENST00000380829 FLT4P35916 1363 aa18.22■□□□□ 0.51
CLCN4-201ENST00000380829 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
CLCN4-201ENST00000380829 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
CLCN4-201ENST00000380829 ADGRL3Q9HAR2 1447 aa18.22■□□□□ 0.51
CLCN4-201ENST00000380829 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
CLCN4-201ENST00000380829 MS4A1P11836 297 aa18.21■□□□□ 0.51
CLCN4-201ENST00000380829 LMOD3Q0VAK6 560 aa18.21■□□□□ 0.51
CLCN4-201ENST00000380829 TRIM27P14373 513 aa18.21■□□□□ 0.51
CLCN4-201ENST00000380829 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
CLCN4-201ENST00000380829 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
CLCN4-201ENST00000380829 GNAI1P63096 354 aa18.2■□□□□ 0.5
CLCN4-201ENST00000380829 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
CLCN4-201ENST00000380829 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
CLCN4-201ENST00000380829 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
CLCN4-201ENST00000380829 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
CLCN4-201ENST00000380829 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
CLCN4-201ENST00000380829 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
CLCN4-201ENST00000380829 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
CLCN4-201ENST00000380829 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
CLCN4-201ENST00000380829 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
CLCN4-201ENST00000380829 RGS3P49796 1198 aa18.18■□□□□ 0.5
CLCN4-201ENST00000380829 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
CLCN4-201ENST00000380829 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
CLCN4-201ENST00000380829 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
CLCN4-201ENST00000380829 BACH2Q9BYV9 841 aa18.17■□□□□ 0.5
CLCN4-201ENST00000380829 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
CLCN4-201ENST00000380829 VAMP4O75379 141 aa18.16■□□□□ 0.5
CLCN4-201ENST00000380829 ALDH1L2Q3SY69 923 aa18.16■□□□□ 0.5
CLCN4-201ENST00000380829 MCM10Q7L590 875 aa18.16■□□□□ 0.5
CLCN4-201ENST00000380829 EYA1Q99502 592 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 KIF16BQ96L93 1317 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 HOXC9P31274 260 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 PSME1Q06323 249 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 NFKBIBQ15653 356 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
CLCN4-201ENST00000380829 AAMPQ13685 434 aa18.14■□□□□ 0.49
CLCN4-201ENST00000380829 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
CLCN4-201ENST00000380829 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
CLCN4-201ENST00000380829 FOXO3O43524 673 aa18.13■□□□□ 0.49
CLCN4-201ENST00000380829 SLC4A3P48751 1232 aa18.13■□□□□ 0.49
CLCN4-201ENST00000380829 LTV1Q96GA3 475 aaPredicted RBP18.13■□□□□ 0.49
CLCN4-201ENST00000380829 PKNOX2Q96KN3 472 aa18.13■□□□□ 0.49
CLCN4-201ENST00000380829 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
CLCN4-201ENST00000380829 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
CLCN4-201ENST00000380829 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
CLCN4-201ENST00000380829 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
CLCN4-201ENST00000380829 IGSF1Q8N6C5 1336 aa18.13■□□□□ 0.49
CLCN4-201ENST00000380829 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
CLCN4-201ENST00000380829 MTHFSDQ2M296 383 aaKnown RBP18.12■□□□□ 0.49
CLCN4-201ENST00000380829 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
CLCN4-201ENST00000380829 KDRP35968 1356 aa18.12■□□□□ 0.49
CLCN4-201ENST00000380829 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms