RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 RLBP1P12271 317 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 ALDH1L2Q3SY69 923 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 OVOS2A0A0J9YW53 1432 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 OVOS2Q6IE36 1432 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 KIF16BQ96L93 1317 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
VPS16-202ENST00000380445 FAM161AQ3B820 660 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
VPS16-202ENST00000380445 GNAI1P63096 354 aa16.13■□□□□ 0.17
VPS16-202ENST00000380445 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
VPS16-202ENST00000380445 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
VPS16-202ENST00000380445 ATF7IPQ6VMQ6 1270 aa16.12■□□□□ 0.17
VPS16-202ENST00000380445 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
VPS16-202ENST00000380445 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
VPS16-202ENST00000380445 USP31Q70CQ4 1352 aa16.12■□□□□ 0.17
VPS16-202ENST00000380445 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
VPS16-202ENST00000380445 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
VPS16-202ENST00000380445 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
VPS16-202ENST00000380445 RGS3P49796 1198 aa16.11■□□□□ 0.17
VPS16-202ENST00000380445 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
VPS16-202ENST00000380445 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
VPS16-202ENST00000380445 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
VPS16-202ENST00000380445 NALCNQ8IZF0 1738 aa16.1■□□□□ 0.17
VPS16-202ENST00000380445 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
VPS16-202ENST00000380445 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
VPS16-202ENST00000380445 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
VPS16-202ENST00000380445 TRIM27P14373 513 aa16.09■□□□□ 0.17
VPS16-202ENST00000380445 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
VPS16-202ENST00000380445 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
VPS16-202ENST00000380445 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
VPS16-202ENST00000380445 PCDHB15Q9Y5E8 787 aa16.08■□□□□ 0.16
VPS16-202ENST00000380445 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.16
VPS16-202ENST00000380445 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
VPS16-202ENST00000380445 ANKLE2Q86XL3 938 aa16.08■□□□□ 0.16
VPS16-202ENST00000380445 DDRGK1Q96HY6 314 aa16.08■□□□□ 0.16
VPS16-202ENST00000380445 CFAP44Q96MT7 982 aa16.08■□□□□ 0.16
VPS16-202ENST00000380445 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
VPS16-202ENST00000380445 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
VPS16-202ENST00000380445 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
VPS16-202ENST00000380445 KCNA6P17658 529 aa16.06■□□□□ 0.16
VPS16-202ENST00000380445 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
VPS16-202ENST00000380445 ITPRIPQ8IWB1 547 aa16.06■□□□□ 0.16
VPS16-202ENST00000380445 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
VPS16-202ENST00000380445 KDM4FA0A1W2PPD8 638 aa16.05■□□□□ 0.16
VPS16-202ENST00000380445 VAMP4O75379 141 aa16.04■□□□□ 0.16
VPS16-202ENST00000380445 HAP1P54257 671 aaPredicted RBP16.04■□□□□ 0.16
VPS16-202ENST00000380445 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
VPS16-202ENST00000380445 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
VPS16-202ENST00000380445 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
VPS16-202ENST00000380445 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
VPS16-202ENST00000380445 FLT4P35916 1363 aa16.04■□□□□ 0.16
VPS16-202ENST00000380445 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
VPS16-202ENST00000380445 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
VPS16-202ENST00000380445 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
VPS16-202ENST00000380445 NBR1Q14596 966 aa16.03■□□□□ 0.16
VPS16-202ENST00000380445 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
VPS16-202ENST00000380445 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.16
VPS16-202ENST00000380445 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
VPS16-202ENST00000380445 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.16
VPS16-202ENST00000380445 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.16
VPS16-202ENST00000380445 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.15
VPS16-202ENST00000380445 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
VPS16-202ENST00000380445 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.15
VPS16-202ENST00000380445 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
VPS16-202ENST00000380445 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
VPS16-202ENST00000380445 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
VPS16-202ENST00000380445 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
VPS16-202ENST00000380445 AMPHP49418 695 aa16■□□□□ 0.15
VPS16-202ENST00000380445 MRPL50Q8N5N7 158 aaKnown RBP16■□□□□ 0.15
VPS16-202ENST00000380445 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
VPS16-202ENST00000380445 SOX12O15370 315 aa16■□□□□ 0.15
VPS16-202ENST00000380445 NLRP6P59044 892 aa16■□□□□ 0.15
VPS16-202ENST00000380445 ZBTB40Q9NUA8 1239 aa16■□□□□ 0.15
VPS16-202ENST00000380445 CHD2O14647 1828 aaKnown RBP15.99■□□□□ 0.15
VPS16-202ENST00000380445 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
VPS16-202ENST00000380445 SETD1BQ9UPS6 1966 aaKnown RBP15.99■□□□□ 0.15
VPS16-202ENST00000380445 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
VPS16-202ENST00000380445 PIK3C2AO00443 1686 aa15.98■□□□□ 0.15
VPS16-202ENST00000380445 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
VPS16-202ENST00000380445 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
VPS16-202ENST00000380445 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
VPS16-202ENST00000380445 API5Q9BZZ5 524 aaKnown RBP15.97■□□□□ 0.15
VPS16-202ENST00000380445 KDRP35968 1356 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 USP54Q70EL1 1684 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
VPS16-202ENST00000380445 CHL1O00533 1208 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
VPS16-202ENST00000380445 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
VPS16-202ENST00000380445 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
VPS16-202ENST00000380445 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
VPS16-202ENST00000380445 KIAA0232Q92628 1395 aa15.95■□□□□ 0.14
VPS16-202ENST00000380445 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
VPS16-202ENST00000380445 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
VPS16-202ENST00000380445 GAS2L2Q8NHY3 880 aa15.94■□□□□ 0.14
VPS16-202ENST00000380445 ABCC4O15439 1325 aa15.93■□□□□ 0.14
VPS16-202ENST00000380445 ZBTB7BO15156 539 aaPredicted RBP15.93■□□□□ 0.14
VPS16-202ENST00000380445 MCM10Q7L590 875 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms