RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RGPD1P0DJD0 1748 aa25.77■■□□□ 1.72
PDLIM5-205ENST00000380180 HSPA2P54652 639 aa25.76■■□□□ 1.72
PDLIM5-205ENST00000380180 TSR2Q969E8 191 aaKnown RBP25.76■■□□□ 1.71
PDLIM5-205ENST00000380180 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
PDLIM5-205ENST00000380180 SBNO1A3KN83 1393 aa25.75■■□□□ 1.71
PDLIM5-205ENST00000380180 PSME1Q06323 249 aa25.75■■□□□ 1.71
PDLIM5-205ENST00000380180 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
PDLIM5-205ENST00000380180 FLT4P35916 1363 aa25.74■■□□□ 1.71
PDLIM5-205ENST00000380180 SULT6B1Q6IMI4 303 aa25.74■■□□□ 1.71
PDLIM5-205ENST00000380180 ORAI2Q96SN7 254 aa25.74■■□□□ 1.71
PDLIM5-205ENST00000380180 KDM4FA0A1W2PPD8 638 aa25.73■■□□□ 1.71
PDLIM5-205ENST00000380180 AMPHP49418 695 aa25.73■■□□□ 1.71
PDLIM5-205ENST00000380180 AEBP1Q8IUX7 1158 aa25.73■■□□□ 1.71
PDLIM5-205ENST00000380180 C19orf44Q9H6X5 657 aa25.72■■□□□ 1.71
PDLIM5-205ENST00000380180 EXOSC9Q06265 439 aaKnown RBP25.7■■□□□ 1.7
PDLIM5-205ENST00000380180 LTN1O94822 1766 aa25.69■■□□□ 1.7
PDLIM5-205ENST00000380180 FOXO3O43524 673 aa25.68■■□□□ 1.7
PDLIM5-205ENST00000380180 CT47B1P0C2W7 299 aaPredicted RBP25.68■■□□□ 1.7
PDLIM5-205ENST00000380180 KIF24Q5T7B8 1368 aa25.67■■□□□ 1.7
PDLIM5-205ENST00000380180 THUMPD2Q9BTF0 503 aaKnown RBP25.66■■□□□ 1.7
PDLIM5-205ENST00000380180 TMEM94Q12767 1356 aa25.66■■□□□ 1.7
PDLIM5-205ENST00000380180 PDE3AQ14432 1141 aa25.66■■□□□ 1.7
PDLIM5-205ENST00000380180 FRAT1Q92837 279 aaPredicted RBP25.66■■□□□ 1.7
PDLIM5-205ENST00000380180 C1orf167Q5SNV9 1468 aa25.66■■□□□ 1.7
PDLIM5-205ENST00000380180 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
PDLIM5-205ENST00000380180 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
PDLIM5-205ENST00000380180 HOXC9P31274 260 aa25.65■■□□□ 1.7
PDLIM5-205ENST00000380180 BCL2L13Q9BXK5 485 aa25.65■■□□□ 1.7
PDLIM5-205ENST00000380180 CALD1Q05682 793 aaKnown RBP25.64■■□□□ 1.7
PDLIM5-205ENST00000380180 LMOD3Q0VAK6 560 aa25.64■■□□□ 1.7
PDLIM5-205ENST00000380180 STRCQ7RTU9 1775 aa25.64■■□□□ 1.7
PDLIM5-205ENST00000380180 LAS1LQ9Y4W2 734 aaKnown RBP25.64■■□□□ 1.69
PDLIM5-205ENST00000380180 KIF1AQ12756 1690 aa25.64■■□□□ 1.69
PDLIM5-205ENST00000380180 LMTK3Q96Q04 1460 aa25.63■■□□□ 1.69
PDLIM5-205ENST00000380180 XPCQ01831 940 aaPredicted RBP25.63■■□□□ 1.69
PDLIM5-205ENST00000380180 EYA1Q99502 592 aa25.62■■□□□ 1.69
PDLIM5-205ENST00000380180 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
PDLIM5-205ENST00000380180 ATF3P18847 181 aa25.61■■□□□ 1.69
PDLIM5-205ENST00000380180 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
PDLIM5-205ENST00000380180 TRPM3Q9HCF6 1732 aaPredicted RBP25.61■■□□□ 1.69
PDLIM5-205ENST00000380180 NFAT5O94916 1531 aa25.6■■□□□ 1.69
PDLIM5-205ENST00000380180 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
PDLIM5-205ENST00000380180 IFT57Q9NWB7 429 aa25.6■■□□□ 1.69
PDLIM5-205ENST00000380180 KDRP35968 1356 aa25.6■■□□□ 1.69
PDLIM5-205ENST00000380180 GNAI1P63096 354 aa25.59■■□□□ 1.69
PDLIM5-205ENST00000380180 PANK1Q8TE04 598 aa25.59■■□□□ 1.69
PDLIM5-205ENST00000380180 ZNF853P0CG23 659 aa25.59■■□□□ 1.69
PDLIM5-205ENST00000380180 DCTN1Q14203 1278 aa25.58■■□□□ 1.69
PDLIM5-205ENST00000380180 KRT28Q7Z3Y7 464 aa25.58■■□□□ 1.69
PDLIM5-205ENST00000380180 MST1RQ04912 1400 aa25.58■■□□□ 1.68
PDLIM5-205ENST00000380180 KCNH5Q8NCM2 988 aa25.58■■□□□ 1.68
PDLIM5-205ENST00000380180 XIRP1Q702N8 1843 aaKnown RBP25.57■■□□□ 1.68
PDLIM5-205ENST00000380180 RTL1A6NKG5 1358 aa25.57■■□□□ 1.68
PDLIM5-205ENST00000380180 DCCP43146 1447 aa25.57■■□□□ 1.68
PDLIM5-205ENST00000380180 SSH1Q8WYL5 1049 aa25.56■■□□□ 1.68
PDLIM5-205ENST00000380180 CFAP44Q96MT7 982 aa25.56■■□□□ 1.68
PDLIM5-205ENST00000380180 SMC4Q9NTJ3 1288 aa25.56■■□□□ 1.68
PDLIM5-205ENST00000380180 COG6Q9Y2V7 657 aa25.56■■□□□ 1.68
PDLIM5-205ENST00000380180 IP6K1Q92551 441 aa25.55■■□□□ 1.68
PDLIM5-205ENST00000380180 MBIPQ9NS73 344 aa25.55■■□□□ 1.68
PDLIM5-205ENST00000380180 TNNQ9UQP3 1299 aa25.55■■□□□ 1.68
PDLIM5-205ENST00000380180 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
PDLIM5-205ENST00000380180 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
PDLIM5-205ENST00000380180 RLBP1P12271 317 aa25.53■■□□□ 1.68
PDLIM5-205ENST00000380180 RBM19Q9Y4C8 960 aaKnown RBP25.53■■□□□ 1.68
PDLIM5-205ENST00000380180 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
PDLIM5-205ENST00000380180 CADPS2Q86UW7 1296 aa25.53■■□□□ 1.68
PDLIM5-205ENST00000380180 GCP02774 474 aa25.52■■□□□ 1.68
PDLIM5-205ENST00000380180 MTHFSDQ2M296 383 aaKnown RBP25.52■■□□□ 1.68
PDLIM5-205ENST00000380180 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
PDLIM5-205ENST00000380180 SLIT3O75094 1523 aa25.52■■□□□ 1.68
PDLIM5-205ENST00000380180 MCM10Q7L590 875 aa25.51■■□□□ 1.67
PDLIM5-205ENST00000380180 CLUAP1Q96AJ1 413 aa25.51■■□□□ 1.67
PDLIM5-205ENST00000380180 ALS2Q96Q42 1657 aa25.5■■□□□ 1.67
PDLIM5-205ENST00000380180 KDM2BQ8NHM5 1336 aa25.5■■□□□ 1.67
PDLIM5-205ENST00000380180 PLEKHG5O94827 1062 aa25.5■■□□□ 1.67
PDLIM5-205ENST00000380180 RGPD2P0DJD1 1756 aa25.5■■□□□ 1.67
PDLIM5-205ENST00000380180 MSH6P52701 1360 aa25.5■■□□□ 1.67
PDLIM5-205ENST00000380180 ZBTB7CA1YPR0 619 aa25.49■■□□□ 1.67
PDLIM5-205ENST00000380180 ALDH1L2Q3SY69 923 aa25.49■■□□□ 1.67
PDLIM5-205ENST00000380180 ZNF428Q96B54 188 aa25.49■■□□□ 1.67
PDLIM5-205ENST00000380180 VAMP4O75379 141 aa25.49■■□□□ 1.67
PDLIM5-205ENST00000380180 TSPYL6Q8N831 410 aa25.49■■□□□ 1.67
PDLIM5-205ENST00000380180 USP19O94966 1318 aa25.48■■□□□ 1.67
PDLIM5-205ENST00000380180 CENPQQ7L2Z9 268 aaPredicted RBP25.47■■□□□ 1.67
PDLIM5-205ENST00000380180 ARHGEF25Q86VW2 580 aa25.47■■□□□ 1.67
PDLIM5-205ENST00000380180 DDX17Q92841 729 aaKnown RBP25.47■■□□□ 1.67
PDLIM5-205ENST00000380180 NOB1Q9ULX3 412 aaKnown RBP25.47■■□□□ 1.67
PDLIM5-205ENST00000380180 DZIP1LQ8IYY4 767 aaKnown RBP25.46■■□□□ 1.67
PDLIM5-205ENST00000380180 GAS2L2Q8NHY3 880 aa25.46■■□□□ 1.67
PDLIM5-205ENST00000380180 ELL2O00472 640 aaPredicted RBP25.46■■□□□ 1.67
PDLIM5-205ENST00000380180 MS4A1P11836 297 aa25.45■■□□□ 1.66
PDLIM5-205ENST00000380180 TRIM27P14373 513 aa25.45■■□□□ 1.66
PDLIM5-205ENST00000380180 C8orf58Q8NAV2 365 aa25.45■■□□□ 1.66
PDLIM5-205ENST00000380180 CHL1O00533 1208 aa25.44■■□□□ 1.66
PDLIM5-205ENST00000380180 ATF7IPQ6VMQ6 1270 aa25.44■■□□□ 1.66
PDLIM5-205ENST00000380180 FTSJ3Q8IY81 847 aaKnown RBP25.44■■□□□ 1.66
PDLIM5-205ENST00000380180 USHBP1Q8N6Y0 703 aa25.44■■□□□ 1.66
PDLIM5-205ENST00000380180 TWISTNBQ3B726 338 aaPredicted RBP25.44■■□□□ 1.66
PDLIM5-205ENST00000380180 RTF1Q92541 710 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 230.5 ms