RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 C3P01024 1663 aa10.26□□□□□ -0.77
PDLIM5-204ENST00000380176 PRKAR2BP31323 418 aa10.26□□□□□ -0.77
PDLIM5-204ENST00000380176 FCHSD2O94868 740 aa10.26□□□□□ -0.77
PDLIM5-204ENST00000380176 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-204ENST00000380176 PHACTR3Q96KR7 559 aa10.26□□□□□ -0.77
PDLIM5-204ENST00000380176 PTPRUQ92729 1446 aa10.25□□□□□ -0.77
PDLIM5-204ENST00000380176 PLEKHG1Q9ULL1 1385 aa10.25□□□□□ -0.77
PDLIM5-204ENST00000380176 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
PDLIM5-204ENST00000380176 IL13P35225 146 aa10.24□□□□□ -0.77
PDLIM5-204ENST00000380176 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
PDLIM5-204ENST00000380176 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
PDLIM5-204ENST00000380176 COG3Q96JB2 828 aa10.24□□□□□ -0.77
PDLIM5-204ENST00000380176 ZBTB47Q9UFB7 747 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-204ENST00000380176 IL16Q14005 1332 aa10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 SMC4Q9NTJ3 1288 aa10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 FER1L4A9Z1Z3 1794 aa10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 DLG5Q8TDM6 1919 aa10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 CDK12Q9NYV4 1490 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-204ENST00000380176 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 ACEP12821 1306 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-204ENST00000380176 RGPD8O14715 1765 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-204ENST00000380176 TRIM27P14373 513 aa10.21□□□□□ -0.77
PDLIM5-204ENST00000380176 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
PDLIM5-204ENST00000380176 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-204ENST00000380176 MVPQ14764 893 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-204ENST00000380176 NFE2L2Q16236 605 aa10.21□□□□□ -0.78
PDLIM5-204ENST00000380176 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-204ENST00000380176 AMOTL2Q9Y2J4 779 aa10.21□□□□□ -0.78
PDLIM5-204ENST00000380176 TTC21BQ7Z4L5 1316 aa10.21□□□□□ -0.78
PDLIM5-204ENST00000380176 NOB1Q9ULX3 412 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 SLIT1O75093 1534 aa10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
PDLIM5-204ENST00000380176 NEFMP07197 916 aa10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 RGL2O15211 777 aa10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 ATF7IPQ6VMQ6 1270 aa10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
PDLIM5-204ENST00000380176 USP6P35125 1406 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 FAM83GA6ND36 823 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 AEBP1Q8IUX7 1158 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 PEAK1Q9H792 1746 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 OVOS2A0A0J9YW53 1432 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 OVOS2Q6IE36 1432 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 SOX12O15370 315 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 AAMPQ13685 434 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 TSPYL6Q8N831 410 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 TBX22Q9Y458 520 aa10.18□□□□□ -0.78
PDLIM5-204ENST00000380176 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 EIF4A2Q14240 407 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 NALCNQ8IZF0 1738 aa10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 ELL2O00472 640 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 PDZRN3Q9UPQ7 1066 aa10.17□□□□□ -0.78
PDLIM5-204ENST00000380176 HSP90AB2PQ58FF8 381 aa10.16□□□□□ -0.78
PDLIM5-204ENST00000380176 THEMISQ8N1K5 641 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-204ENST00000380176 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
PDLIM5-204ENST00000380176 VAMP4O75379 141 aa10.16□□□□□ -0.78
PDLIM5-204ENST00000380176 SSH2Q76I76 1423 aa10.16□□□□□ -0.78
PDLIM5-204ENST00000380176 SEC24BO95487 1268 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 ZNF853P0CG23 659 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 RWDD1Q9H446 243 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 DIP2AQ14689 1571 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 SLC4A3P48751 1232 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 SULT6B1Q6IMI4 303 aa10.15□□□□□ -0.78
PDLIM5-204ENST00000380176 PTCH1Q13635 1447 aa10.15□□□□□ -0.79
PDLIM5-204ENST00000380176 IFT57Q9NWB7 429 aa10.15□□□□□ -0.79
PDLIM5-204ENST00000380176 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.79
PDLIM5-204ENST00000380176 KIF16BQ96L93 1317 aa10.14□□□□□ -0.79
PDLIM5-204ENST00000380176 GNAI1P63096 354 aa10.14□□□□□ -0.79
PDLIM5-204ENST00000380176 XRN1Q8IZH2 1706 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-204ENST00000380176 KCNA6P17658 529 aa10.14□□□□□ -0.79
PDLIM5-204ENST00000380176 C8orf58Q8NAV2 365 aa10.14□□□□□ -0.79
PDLIM5-204ENST00000380176 USP19O94966 1318 aa10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 RGPD1P0DJD0 1748 aa10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 USP31Q70CQ4 1352 aa10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 MRPL50Q8N5N7 158 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 NGDNQ8NEJ9 315 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 IPO8O15397 1037 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 CALD1Q05682 793 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-204ENST00000380176 FMN2Q9NZ56 1722 aa10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 MAP3K19Q56UN5 1328 aa10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 RIMS1Q86UR5 1692 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms