RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
RFC3-201ENST00000380071 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
RFC3-201ENST00000380071 ZBTB7BO15156 539 aaPredicted RBP15.34■□□□□ 0.05
RFC3-201ENST00000380071 REREQ9P2R6 1566 aa15.34■□□□□ 0.05
RFC3-201ENST00000380071 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
RFC3-201ENST00000380071 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
RFC3-201ENST00000380071 C1orf115Q9H7X2 142 aa15.34■□□□□ 0.05
RFC3-201ENST00000380071 ZNF853P0CG23 659 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 COG3Q96JB2 828 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 CPS1P31327 1500 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 GNAI1P63096 354 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
RFC3-201ENST00000380071 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
RFC3-201ENST00000380071 CHD1LQ86WJ1 897 aa15.32■□□□□ 0.04
RFC3-201ENST00000380071 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
RFC3-201ENST00000380071 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
RFC3-201ENST00000380071 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
RFC3-201ENST00000380071 AATKQ6ZMQ8 1374 aa15.31■□□□□ 0.04
RFC3-201ENST00000380071 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
RFC3-201ENST00000380071 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
RFC3-201ENST00000380071 PRR36Q9H6K5 1346 aa15.3■□□□□ 0.04
RFC3-201ENST00000380071 CDK12Q9NYV4 1490 aaPredicted RBP15.3■□□□□ 0.04
RFC3-201ENST00000380071 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
RFC3-201ENST00000380071 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
RFC3-201ENST00000380071 SIRT2Q8IXJ6 389 aa15.28■□□□□ 0.04
RFC3-201ENST00000380071 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
RFC3-201ENST00000380071 DLG5Q8TDM6 1919 aa15.28■□□□□ 0.04
RFC3-201ENST00000380071 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
RFC3-201ENST00000380071 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.04
RFC3-201ENST00000380071 ANO8Q9HCE9 1232 aaPredicted RBP15.27■□□□□ 0.04
RFC3-201ENST00000380071 PIK3R4Q99570 1358 aa15.27■□□□□ 0.03
RFC3-201ENST00000380071 NUTM2FA1L443 756 aa15.27■□□□□ 0.03
RFC3-201ENST00000380071 SIRT1Q96EB6 747 aa15.27■□□□□ 0.03
RFC3-201ENST00000380071 ABCC4O15439 1325 aa15.26■□□□□ 0.03
RFC3-201ENST00000380071 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
RFC3-201ENST00000380071 LMOD3Q0VAK6 560 aa15.26■□□□□ 0.03
RFC3-201ENST00000380071 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
RFC3-201ENST00000380071 GCC1Q96CN9 775 aa15.25■□□□□ 0.03
RFC3-201ENST00000380071 ROBO2Q9HCK4 1378 aa15.25■□□□□ 0.03
RFC3-201ENST00000380071 HDGFP51858 240 aaKnown RBP15.25■□□□□ 0.03
RFC3-201ENST00000380071 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
RFC3-201ENST00000380071 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
RFC3-201ENST00000380071 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
RFC3-201ENST00000380071 TECPR2O15040 1411 aa15.24■□□□□ 0.03
RFC3-201ENST00000380071 BMP2KLQ5H9B9 411 aa15.24■□□□□ 0.03
RFC3-201ENST00000380071 CHMP4BQ9H444 224 aaKnown RBP15.24■□□□□ 0.03
RFC3-201ENST00000380071 C3P01024 1663 aa15.23■□□□□ 0.03
RFC3-201ENST00000380071 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
RFC3-201ENST00000380071 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
RFC3-201ENST00000380071 AKAP12Q02952 1782 aa15.22■□□□□ 0.03
RFC3-201ENST00000380071 ACEP12821 1306 aa15.22■□□□□ 0.03
RFC3-201ENST00000380071 API5Q9BZZ5 524 aaKnown RBP15.22■□□□□ 0.03
RFC3-201ENST00000380071 TNRQ92752 1358 aa15.22■□□□□ 0.03
RFC3-201ENST00000380071 MCM10Q7L590 875 aa15.22■□□□□ 0.03
RFC3-201ENST00000380071 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
RFC3-201ENST00000380071 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
RFC3-201ENST00000380071 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.03
RFC3-201ENST00000380071 HSP90AB2PQ58FF8 381 aa15.21■□□□□ 0.03
RFC3-201ENST00000380071 CHMP5Q9NZZ3 219 aa15.21■□□□□ 0.03
RFC3-201ENST00000380071 SOX12O15370 315 aa15.21■□□□□ 0.02
RFC3-201ENST00000380071 MCM4P33991 863 aa15.21■□□□□ 0.02
RFC3-201ENST00000380071 ITSN1Q15811 1721 aa15.2■□□□□ 0.02
RFC3-201ENST00000380071 LTKP29376 864 aa15.2■□□□□ 0.02
RFC3-201ENST00000380071 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
RFC3-201ENST00000380071 KIF2CQ99661 725 aa15.19■□□□□ 0.02
RFC3-201ENST00000380071 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
RFC3-201ENST00000380071 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
RFC3-201ENST00000380071 CHL1O00533 1208 aa15.18■□□□□ 0.02
RFC3-201ENST00000380071 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
RFC3-201ENST00000380071 SNX21Q969T3 373 aa15.17■□□□□ 0.02
RFC3-201ENST00000380071 SLC26A8Q96RN1 970 aa15.17■□□□□ 0.02
RFC3-201ENST00000380071 INTS3Q68E01 1043 aaKnown RBP15.17■□□□□ 0.02
RFC3-201ENST00000380071 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
RFC3-201ENST00000380071 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
RFC3-201ENST00000380071 UBR1Q8IWV7 1749 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
RFC3-201ENST00000380071 GSPT1P15170 499 aaKnown RBP15.16■□□□□ 0.02
RFC3-201ENST00000380071 DDIT3P35638 169 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
RFC3-201ENST00000380071 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
RFC3-201ENST00000380071 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
RFC3-201ENST00000380071 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
RFC3-201ENST00000380071 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
RFC3-201ENST00000380071 USP6P35125 1406 aa15.15■□□□□ 0.02
RFC3-201ENST00000380071 FOXO3O43524 673 aa15.15■□□□□ 0.02
RFC3-201ENST00000380071 PEAK1Q9H792 1746 aa15.14■□□□□ 0.01
RFC3-201ENST00000380071 RGS12O14924 1447 aa15.14■□□□□ 0.01
RFC3-201ENST00000380071 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
RFC3-201ENST00000380071 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
RFC3-201ENST00000380071 ARXQ96QS3 562 aa15.14■□□□□ 0.01
RFC3-201ENST00000380071 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.14■□□□□ 0.01
RFC3-201ENST00000380071 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
RFC3-201ENST00000380071 HSP90AB1P08238 724 aaKnown RBP15.13■□□□□ 0.01
RFC3-201ENST00000380071 TRAK2O60296 914 aa15.13■□□□□ 0.01
RFC3-201ENST00000380071 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms