RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SYNMO15061 1565 aa13.86□□□□□ -0.19
SMAD9-202ENST00000379826 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
SMAD9-202ENST00000379826 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
SMAD9-202ENST00000379826 ABCA8O94911 1581 aa13.85□□□□□ -0.19
SMAD9-202ENST00000379826 SYCE3A1L190 88 aa13.85□□□□□ -0.19
SMAD9-202ENST00000379826 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-202ENST00000379826 ADCY10Q96PN6 1610 aa13.85□□□□□ -0.19
SMAD9-202ENST00000379826 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
SMAD9-202ENST00000379826 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
SMAD9-202ENST00000379826 BCL11BQ9C0K0 894 aaPredicted RBP13.85□□□□□ -0.19
SMAD9-202ENST00000379826 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 CCDC39Q9UFE4 941 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 MCM10Q7L590 875 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 MBIPQ9NS73 344 aa13.84□□□□□ -0.19
SMAD9-202ENST00000379826 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
SMAD9-202ENST00000379826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMAD9-202ENST00000379826 C16orf71Q8IYS4 520 aaPredicted RBP13.83□□□□□ -0.19
SMAD9-202ENST00000379826 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.19
SMAD9-202ENST00000379826 ERC2O15083 957 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
SMAD9-202ENST00000379826 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
SMAD9-202ENST00000379826 CLCN1P35523 988 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 USP19O94966 1318 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 BAG4O95429 457 aaKnown RBP13.83□□□□□ -0.2
SMAD9-202ENST00000379826 NME9Q86XW9 330 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
SMAD9-202ENST00000379826 ZBTB40Q9NUA8 1239 aa13.82□□□□□ -0.2
SMAD9-202ENST00000379826 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
SMAD9-202ENST00000379826 TSHZ3Q63HK5 1081 aa13.82□□□□□ -0.2
SMAD9-202ENST00000379826 TSPYL6Q8N831 410 aa13.82□□□□□ -0.2
SMAD9-202ENST00000379826 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
SMAD9-202ENST00000379826 ANKRD36BQ8N2N9 1353 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 UQCRHP07919 91 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 NUTM2GQ5VZR2 741 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 FYB1O15117 783 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 RRP9O43818 475 aaKnown RBP13.81□□□□□ -0.2
SMAD9-202ENST00000379826 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
SMAD9-202ENST00000379826 ZSCAN30Q86W11 494 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
SMAD9-202ENST00000379826 ZNF428Q96B54 188 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
SMAD9-202ENST00000379826 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 ATP10AO60312 1499 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 RAB3GAP1Q15042 981 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 NSD2O96028 1365 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
SMAD9-202ENST00000379826 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
SMAD9-202ENST00000379826 ZSCAN23Q3MJ62 389 aa13.8□□□□□ -0.2
SMAD9-202ENST00000379826 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 SNX21Q969T3 373 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 F6X3S4 739 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
SMAD9-202ENST00000379826 ANTXR1Q9H6X2 564 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 HSPA2P54652 639 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 IDI1Q13907 227 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 TTC22Q5TAA0 569 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 MYO5CQ9NQX4 1742 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 PTPRTO14522 1441 aa13.78□□□□□ -0.2
SMAD9-202ENST00000379826 GPATCH3Q96I76 525 aa13.77□□□□□ -0.2
SMAD9-202ENST00000379826 GNAI2P04899 355 aa13.77□□□□□ -0.2
SMAD9-202ENST00000379826 IL16Q14005 1332 aa13.77□□□□□ -0.2
SMAD9-202ENST00000379826 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 FIBPO43427 364 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
SMAD9-202ENST00000379826 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
SMAD9-202ENST00000379826 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
SMAD9-202ENST00000379826 CD109Q6YHK3 1445 aa13.76□□□□□ -0.21
SMAD9-202ENST00000379826 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
SMAD9-202ENST00000379826 FOSBP53539 338 aa13.76□□□□□ -0.21
SMAD9-202ENST00000379826 MBD3O95983 291 aa13.76□□□□□ -0.21
SMAD9-202ENST00000379826 E9PCH4 1651 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 SPC24Q8NBT2 197 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
SMAD9-202ENST00000379826 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
SMAD9-202ENST00000379826 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms