RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 PLEKHG3A1L390 1219 aa17.58■□□□□ 0.4
SNCAIP-203ENST00000379538 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
SNCAIP-203ENST00000379538 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNCAIP-203ENST00000379538 ZMYND15Q9H091 742 aa17.58■□□□□ 0.4
SNCAIP-203ENST00000379538 ZNF335Q9H4Z2 1342 aaPredicted RBP17.58■□□□□ 0.4
SNCAIP-203ENST00000379538 RLBP1P12271 317 aa17.57■□□□□ 0.4
SNCAIP-203ENST00000379538 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
SNCAIP-203ENST00000379538 COG3Q96JB2 828 aa17.57■□□□□ 0.4
SNCAIP-203ENST00000379538 INSRP06213 1382 aa17.56■□□□□ 0.4
SNCAIP-203ENST00000379538 MCM4P33991 863 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 TBC1D32Q96NH3 1257 aa17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
SNCAIP-203ENST00000379538 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
SNCAIP-203ENST00000379538 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
SNCAIP-203ENST00000379538 USP6P35125 1406 aa17.54■□□□□ 0.4
SNCAIP-203ENST00000379538 FSD2A1L4K1 749 aa17.54■□□□□ 0.4
SNCAIP-203ENST00000379538 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
SNCAIP-203ENST00000379538 HMOX1P09601 288 aa17.53■□□□□ 0.4
SNCAIP-203ENST00000379538 HSP90AA2PQ14568 343 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-203ENST00000379538 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-203ENST00000379538 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
SNCAIP-203ENST00000379538 NLRP6P59044 892 aa17.52■□□□□ 0.4
SNCAIP-203ENST00000379538 NSD2O96028 1365 aa17.52■□□□□ 0.4
SNCAIP-203ENST00000379538 E9PSI1 815 aa17.52■□□□□ 0.39
SNCAIP-203ENST00000379538 TRAK2O60296 914 aa17.52■□□□□ 0.39
SNCAIP-203ENST00000379538 ABTB2Q8N961 1025 aa17.52■□□□□ 0.39
SNCAIP-203ENST00000379538 ZBTB7CA1YPR0 619 aa17.51■□□□□ 0.39
SNCAIP-203ENST00000379538 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
SNCAIP-203ENST00000379538 MFAP1P55081 439 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-203ENST00000379538 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-203ENST00000379538 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
SNCAIP-203ENST00000379538 CLCN1P35523 988 aa17.5■□□□□ 0.39
SNCAIP-203ENST00000379538 PSME1Q06323 249 aa17.5■□□□□ 0.39
SNCAIP-203ENST00000379538 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
SNCAIP-203ENST00000379538 HSP90AA1P07900 732 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-203ENST00000379538 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
SNCAIP-203ENST00000379538 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
SNCAIP-203ENST00000379538 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
SNCAIP-203ENST00000379538 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
SNCAIP-203ENST00000379538 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
SNCAIP-203ENST00000379538 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
SNCAIP-203ENST00000379538 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-203ENST00000379538 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-203ENST00000379538 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
SNCAIP-203ENST00000379538 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
SNCAIP-203ENST00000379538 ITSN1Q15811 1721 aa17.46■□□□□ 0.39
SNCAIP-203ENST00000379538 ATF3P18847 181 aa17.46■□□□□ 0.39
SNCAIP-203ENST00000379538 SHPRHQ149N8 1683 aa17.46■□□□□ 0.39
SNCAIP-203ENST00000379538 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
SNCAIP-203ENST00000379538 SSH2Q76I76 1423 aa17.46■□□□□ 0.38
SNCAIP-203ENST00000379538 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
SNCAIP-203ENST00000379538 RARSP54136 660 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-203ENST00000379538 GLIPR1L2Q4G1C9 344 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 GAS2L3Q86XJ1 694 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
SNCAIP-203ENST00000379538 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
SNCAIP-203ENST00000379538 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
SNCAIP-203ENST00000379538 MYH16Q9H6N6 1097 aa17.43■□□□□ 0.38
SNCAIP-203ENST00000379538 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
SNCAIP-203ENST00000379538 ESPNB1AK53 854 aa17.42■□□□□ 0.38
SNCAIP-203ENST00000379538 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-203ENST00000379538 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
SNCAIP-203ENST00000379538 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 IL13P35225 146 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 CHMP5Q9NZZ3 219 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 ANKARQ7Z5J8 1434 aa17.41■□□□□ 0.38
SNCAIP-203ENST00000379538 MRE11P49959 708 aa17.4■□□□□ 0.38
SNCAIP-203ENST00000379538 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-203ENST00000379538 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
SNCAIP-203ENST00000379538 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
SNCAIP-203ENST00000379538 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.38
SNCAIP-203ENST00000379538 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.38
SNCAIP-203ENST00000379538 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.38
SNCAIP-203ENST00000379538 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
SNCAIP-203ENST00000379538 C1orf167Q5SNV9 1468 aa17.39■□□□□ 0.37
SNCAIP-203ENST00000379538 AMPHP49418 695 aa17.39■□□□□ 0.37
SNCAIP-203ENST00000379538 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-203ENST00000379538 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
SNCAIP-203ENST00000379538 PIK3C2AO00443 1686 aa17.37■□□□□ 0.37
SNCAIP-203ENST00000379538 SULT6B1Q6IMI4 303 aa17.37■□□□□ 0.37
SNCAIP-203ENST00000379538 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
SNCAIP-203ENST00000379538 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms