RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
ARHGEF1-204ENST00000378152 CPS1P31327 1500 aa20.03■□□□□ 0.8
ARHGEF1-204ENST00000378152 TECPR2O15040 1411 aa20.02■□□□□ 0.8
ARHGEF1-204ENST00000378152 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-204ENST00000378152 IL16Q14005 1332 aa20.01■□□□□ 0.79
ARHGEF1-204ENST00000378152 HSP90AA1P07900 732 aaKnown RBP20.01■□□□□ 0.79
ARHGEF1-204ENST00000378152 FBLN1P23142 703 aa20.01■□□□□ 0.79
ARHGEF1-204ENST00000378152 DDIT3P35638 169 aa20.01■□□□□ 0.79
ARHGEF1-204ENST00000378152 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
ARHGEF1-204ENST00000378152 ZNF142P52746 1687 aaPredicted RBP20■□□□□ 0.79
ARHGEF1-204ENST00000378152 CD2BP2O95400 341 aaKnown RBP20■□□□□ 0.79
ARHGEF1-204ENST00000378152 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
ARHGEF1-204ENST00000378152 RIMS1Q86UR5 1692 aaKnown RBP20■□□□□ 0.79
ARHGEF1-204ENST00000378152 SNX21Q969T3 373 aa20■□□□□ 0.79
ARHGEF1-204ENST00000378152 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
ARHGEF1-204ENST00000378152 MED14O60244 1454 aa19.99■□□□□ 0.79
ARHGEF1-204ENST00000378152 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
ARHGEF1-204ENST00000378152 CLCN1P35523 988 aa19.99■□□□□ 0.79
ARHGEF1-204ENST00000378152 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
ARHGEF1-204ENST00000378152 ELL2O00472 640 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF1-204ENST00000378152 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
ARHGEF1-204ENST00000378152 KIF2CQ99661 725 aa19.98■□□□□ 0.79
ARHGEF1-204ENST00000378152 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
ARHGEF1-204ENST00000378152 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
ARHGEF1-204ENST00000378152 GAS2L3Q86XJ1 694 aa19.97■□□□□ 0.79
ARHGEF1-204ENST00000378152 PRKAR2BP31323 418 aa19.97■□□□□ 0.79
ARHGEF1-204ENST00000378152 ALDH1L2Q3SY69 923 aa19.97■□□□□ 0.79
ARHGEF1-204ENST00000378152 FAM135BQ49AJ0 1406 aa19.96■□□□□ 0.79
ARHGEF1-204ENST00000378152 BMP2KLQ5H9B9 411 aa19.96■□□□□ 0.79
ARHGEF1-204ENST00000378152 ADAMTS13Q76LX8 1427 aa19.96■□□□□ 0.79
ARHGEF1-204ENST00000378152 GBP4Q96PP9 640 aa19.96■□□□□ 0.79
ARHGEF1-204ENST00000378152 PRAM1Q96QH2 718 aa19.96■□□□□ 0.79
ARHGEF1-204ENST00000378152 SIRT1Q96EB6 747 aa19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 ZBTB7BO15156 539 aaPredicted RBP19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 RAB3GAP1Q15042 981 aa19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 PPIP5K1Q6PFW1 1433 aa19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 HMOX1P09601 288 aa19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 TBC1D9Q6ZT07 1266 aa19.95■□□□□ 0.78
ARHGEF1-204ENST00000378152 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
ARHGEF1-204ENST00000378152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.94■□□□□ 0.78
ARHGEF1-204ENST00000378152 TSPYL6Q8N831 410 aa19.94■□□□□ 0.78
ARHGEF1-204ENST00000378152 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
ARHGEF1-204ENST00000378152 METP08581 1390 aa19.93■□□□□ 0.78
ARHGEF1-204ENST00000378152 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 ESPNB1AK53 854 aa19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 CABP1Q9NZU7 370 aa19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF1-204ENST00000378152 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 SSFA2P28290 1259 aa19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 GCC1Q96CN9 775 aa19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 TRIM44Q96DX7 344 aaPredicted RBP19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 VAMP4O75379 141 aa19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 FCHSD2O94868 740 aa19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 MRPL50Q8N5N7 158 aaKnown RBP19.91■□□□□ 0.78
ARHGEF1-204ENST00000378152 CEBPAP49715 358 aaPredicted RBP19.9■□□□□ 0.78
ARHGEF1-204ENST00000378152 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
ARHGEF1-204ENST00000378152 ANKRD26Q9UPS8 1709 aa19.9■□□□□ 0.78
ARHGEF1-204ENST00000378152 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
ARHGEF1-204ENST00000378152 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
ARHGEF1-204ENST00000378152 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
ARHGEF1-204ENST00000378152 ISY1Q9ULR0 285 aaKnown RBP19.88■□□□□ 0.77
ARHGEF1-204ENST00000378152 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
ARHGEF1-204ENST00000378152 SKOR2Q2VWA4 1001 aaPredicted RBP19.87■□□□□ 0.77
ARHGEF1-204ENST00000378152 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
ARHGEF1-204ENST00000378152 NFE2L2Q16236 605 aa19.86■□□□□ 0.77
ARHGEF1-204ENST00000378152 XRN1Q8IZH2 1706 aaKnown RBP19.86■□□□□ 0.77
ARHGEF1-204ENST00000378152 LTKP29376 864 aa19.85■□□□□ 0.77
ARHGEF1-204ENST00000378152 MBIPQ9NS73 344 aa19.85■□□□□ 0.77
ARHGEF1-204ENST00000378152 CDC45O75419 566 aa19.84■□□□□ 0.77
ARHGEF1-204ENST00000378152 BRPF1P55201 1214 aaPredicted RBP19.84■□□□□ 0.77
ARHGEF1-204ENST00000378152 ATP7BP35670 1465 aa19.84■□□□□ 0.77
ARHGEF1-204ENST00000378152 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
ARHGEF1-204ENST00000378152 PODXL2Q9NZ53 605 aa19.84■□□□□ 0.77
ARHGEF1-204ENST00000378152 GSPT1P15170 499 aaKnown RBP19.83■□□□□ 0.77
ARHGEF1-204ENST00000378152 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF1-204ENST00000378152 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
ARHGEF1-204ENST00000378152 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
ARHGEF1-204ENST00000378152 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.76
ARHGEF1-204ENST00000378152 ARHGAP45Q92619 1136 aa19.83■□□□□ 0.76
ARHGEF1-204ENST00000378152 DDX49Q9Y6V7 483 aaKnown RBP19.83■□□□□ 0.76
ARHGEF1-204ENST00000378152 KIF20BQ96Q89 1820 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 AK9Q5TCS8 1911 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 C8orf58Q8NAV2 365 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 GOLGA6L22H0YM25 854 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 GNAI1P63096 354 aa19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 C16orf71Q8IYS4 520 aaPredicted RBP19.82■□□□□ 0.76
ARHGEF1-204ENST00000378152 ABCC4O15439 1325 aa19.81■□□□□ 0.76
ARHGEF1-204ENST00000378152 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.81■□□□□ 0.76
ARHGEF1-204ENST00000378152 BAG4O95429 457 aaKnown RBP19.81■□□□□ 0.76
ARHGEF1-204ENST00000378152 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
ARHGEF1-204ENST00000378152 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
ARHGEF1-204ENST00000378152 PTMSP20962 102 aa19.8■□□□□ 0.76
ARHGEF1-204ENST00000378152 PTPRUQ92729 1446 aa19.8■□□□□ 0.76
ARHGEF1-204ENST00000378152 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
ARHGEF1-204ENST00000378152 NCLP19338 710 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms